Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3813 ATGTCTGTAATCACAGAGGAGATGAGAGCGAAAGCAGAGATGTACGAGGGTGAGCAACTATGCCAAGAAAAATCCAAGTTGTTGCTGAAGGAAGTTGGGCTACCCAACGGGCTTTTGCCGTTGAAAGAGATGGAGGAATGTGGGTATGTGAAGGAGACAGGGTTTGTGTGGCTGAAGCAGAAGAAGAGCTGTACACACAAGTTCGAAAAGATTGGGAAGCTGGTGTCCTATGATAAGTTGGTGACGGCCCATGTTGAGCCCGGAAAGATCAAGAAACTCACTGGTGTCAAGACCAAGGAGCTATTGGTTTGGATCACTCTGAGTGATATATATGTCGATGATCCACCCACTGGAAAGATCACTTTCCAGACTCCTGCAGGGCTATTCAGGTCTTTTCCTGTCTCTGCTTTTGAAATACAAGAGGAGCATCCCAAGCAGGTTCAAGAACCAGATGCTGCTGCAGTTGTGGAGGTCACAGAggtctaa 486 0.4671 MSVITEEMRAKAEMYEGEQLCQEKSKLLLKEVGLPNGLLPLKEMEECGYVKETGFVWLKQKKSCTHKFEKIGKLVSYDKLVTAHVEPGKIKKLTGVKTKELLVWITLSDIYVDDPPTGKITFQTPAGLFRSFPVSAFEIQEEHPKQVQEPDAAAVVEVTEV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3813 161 PANTHER T31J12.3 PROTEIN-RELATED 2 156 IPR007493 -
Sto13g3813 161 SUPERFAMILY At5g01610-like 3 143 IPR036758 -
Sto13g3813 161 Pfam Protein of unknown function, DUF538 28 138 IPR007493 -
Sto13g3813 161 Gene3D - 4 148 IPR036758 -
Sto13g3813 161 PANTHER PLANT/F25P12-18 PROTEIN 2 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3813 Sto-Chr13 39630880 39631365 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3813 - - cpap:110815376 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0263 8 1759361 1759858 Sto13g3813 13 39630880 39631365 CCT
Sto13g3813 13 39630880 39631365 Sto13g3813 13 39630880 39631365 ECH