Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3803 ATGGGATCCGAAGGTCCTCCAGCACCAGTAACAGTTCATATAACAGGTTTTAAAAAGTTCCATGGAGTTTCAGAGAATCCAACAGAGACCATTGTCAATAATTTGACAGAGTATATGAAGAAGAAGGGCTTACCAAAAGGTTTATTTCTTGGGAGTTGCAGCATCCTTGAAACTGCTGGTCAAGGAGCACTTGTTCCCTTGTACCAGACATTGCAATCTGCCATTAATGCCAAGGACTGTGAATCTTCAAATTCTGGAAAAGTTATTTGGCTGCATTTTGGAGTTAACAGTGGTGCAACAAGGTTTGCTATCGAGCATCAAGCCGTCAATGAGGCTACTTTCCGTTGCCCTGATGAAATGGGATGGAAGCCCCAGAAAGTCCCCATTGTTCCATCAGATGGTGGAATTTCACGAACACGCGAGACTTGCCTTCCTGTAGAGCAGATCACCATGGCCTTGGCAAAGAAAGGTTACAATATTATGACATCTGACGATGCAGGCAGATTCGTGTGCAATTACGTATACTATCATTCGCTTCGCTTCGCCGAGCAGAATGGCATCAAATCCCTCTTTGTGCATGTCCCTCTCTTCCTCACAATAGATGAAGATACCCAAATGCAATTTGTTGCTTCCTTGTTAGAGGTACTTGCATCAATATGTTAG 663 0.4359 MGSEGPPAPVTVHITGFKKFHGVSENPTETIVNNLTEYMKKKGLPKGLFLGSCSILETAGQGALVPLYQTLQSAINAKDCESSNSGKVIWLHFGVNSGATRFAIEHQAVNEATFRCPDEMGWKPQKVPIVPSDGGISRTRETCLPVEQITMALAKKGYNIMTSDDAGRFVCNYVYYHSLRFAEQNGIKSLFVHVPLFLTIDEDTQMQFVASLLEVLASIC 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3803 220 CDD Peptidase_C15 10 218 IPR000816 GO:0005829|GO:0006508|GO:0016920
Sto13g3803 220 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 11 218 IPR036440 -
Sto13g3803 220 Pfam Pyroglutamyl peptidase 12 197 IPR016125 -
Sto13g3803 220 PIRSF Pyrrolidone-crbxlat_pptds 9 220 IPR000816 GO:0005829|GO:0006508|GO:0016920
Sto13g3803 220 PANTHER BNAA09G15240D PROTEIN 1 219 - -
Sto13g3803 220 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 1 219 IPR016125 -
Sto13g3803 220 Gene3D - 10 219 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3803 Sto-Chr13 39588851 39590352 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3803 K01304 - rcu:8269870 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0278 8 1817479 1818853 Sto13g3803 13 39588851 39590352 CCT
Sto13g3803 13 39588851 39590352 Sto13g3803 13 39588851 39590352 ECH