Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3796 atGGCCGCTCACGACCACCTCAACGGCGATAACTCCATTTCCCACATACCCAAAAAGCCTAAGCTATCTTCCTTCATCACTCAATCCGAACTTGAATCCGAATTCTCTCACCACGATCCCGCTGTTGCTCGGATTAACAACGGTAGTTTCGGTTCCTGTCCTGCTTCCGTCATTGCCGCTCAGCAACAATGGCAGCTTAAGTTTCTCCGTCAACCGGACCATTTCTACTTTAACGACCTCAAGAAGGGGATTCTTCGATCCAGGACCATAATCAAGGAAATTGTTAATGCGGACCATGTCGATGAGATTTCTATCGTTGATAACGCCACTACGGCTGCTGCTATCGTCCTTCAGCAGATCGCCTGGGCTTTTCAGGAAGGAAAATTTCAGAAAGGAGACGTCGCCGTCATGCTTCATTACGCATATGGTGCCGTCAAGAAATCAATGGAGGCCTATGTTACTCGTGCCGGATGTAGAGTCATCGAGGTTCAATTGCCTTTTCCTGTGAGTTCTAATGATGAGATTATTAGTGAATTCAGGAGGGCACTGGAGAGAGGAAAGGACGCAGCTCATTCTCTTGGGTTTACCGATGTTGATATGAAAGAGATTGGAGCAGATTTTTACACCAGCAATTTGCATAAGTGGTTCTTTTGCCCACCTTCCATTGCATTTCTGTATACTCGGAAGTCACCCAGATGTTCTGAATTGCACCATCCTGTGGTTTCCCATGAGTATGGCAACGGGTTGGCCGATGAAAGTGCTTGGATTGGCACAAGAGATTATAGTGCCCAATTGGTGGTTCCTGCAGCTCTGGAATTTGTCAATAGATTTGAAGGTGGCATTGAAGGAATCAAGAGGAGGAATCATGATGCTGTTGTGGAGATGGGATGGATGTTGGCCACAGCATGGGGAACCCATCTTGGGAGTCCACCAGATATGTGTGGAAGCATGATCATGGTAGGGTTACCTGCTTGCTTGGGGATAATGACTGAGTCTGATACTCTCAAGTTAAGAACTCTTTTGAGGGATGATTTTGGCGTTGAAGTGCCAATATATTATCGACCACCAAAAGATGGGGAAATTGGATCACTAACTGGATATGCCCGAATTTCTTATCAAGTCTACAATAAAGTTGATGATTATTACAAGTTCAGGGATGCAATTAATCAACTTGTACGCAAGGAGTTTACTTGTGCCCTTCTTTCTAACTGA 1212 0.453 MAAHDHLNGDNSISHIPKKPKLSSFITQSELESEFSHHDPAVARINNGSFGSCPASVIAAQQQWQLKFLRQPDHFYFNDLKKGILRSRTIIKEIVNADHVDEISIVDNATTAAAIVLQQIAWAFQEGKFQKGDVAVMLHYAYGAVKKSMEAYVTRAGCRVIEVQLPFPVSSNDEIISEFRRALERGKDAAHSLGFTDVDMKEIGADFYTSNLHKWFFCPPSIAFLYTRKSPRCSELHHPVVSHEYGNGLADESAWIGTRDYSAQLVVPAALEFVNRFEGGIEGIKRRNHDAVVEMGWMLATAWGTHLGSPPDMCGSMIMVGLPACLGIMTESDTLKLRTLLRDDFGVEVPIYYRPPKDGEIGSLTGYARISYQVYNKVDDYYKFRDAINQLVRKEFTCALLSN 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3796 403 Gene3D - 70 187 IPR015421 GO:0003824
Sto13g3796 403 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 8 188 - -
Sto13g3796 403 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 188 402 - -
Sto13g3796 403 PANTHER L-CYSTEINE DESULFHYDRASE 8 188 - -
Sto13g3796 403 PANTHER L-CYSTEINE DESULFHYDRASE 188 402 - -
Sto13g3796 403 Gene3D - 188 293 IPR015421 GO:0003824
Sto13g3796 403 SUPERFAMILY PLP-dependent transferases 38 393 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3796 Sto-Chr13 39555154 39556488 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3796 K22207 - gmx:100786129 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0302 8 1955182 1957303 Sto13g3796 13 39555154 39556488 CCT
Sto13g3796 13 39555154 39556488 Sto13g3796 13 39555154 39556488 ECH