Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3680 ATGGATACCCTGTGTTTTAAAGGTGGTATATCTGGGATTCCGCCCTCCATTTCTATTAGTGGATCTTTGGATGCACGCACAAATCCCTCTCAGGTGAGCGCGGTGGGGAGGCCCTCCACGGAGAAATCGCCGCAGAAGTCGGTGTTTTCCAGATTCTCCTTTAAATACCCTTTGAGATCTTTCTGGCCTGGCGGAGGCGGAAATACCAGGCACAATGGGTTGGCCATCGACGACGCCGTATCGGTGGAAGATGGTGAAGGGAAAGCTGTTGTTCAAGAGGATTGCGAGAATGGAGACACGTGTCCAGAGGGTCAGAATGGGAATTGGGTCTTGAAGATTTTGCACGTTAATTCTCTCTGGAGGGGGGAACAGGGGAACGGTGCTAATGGCGGCGTTGAGGGGATCGAAGAAGAGGGCGTCGCTAATGATCAGAGAAAGGGGTCTGAGAGTGATAATGAGGAGCTGTGTGATGCTTGTAATATTGATGACGACCACACTGAAGATGTTCAATTTGATAGGGATTCCTTTTCAAGATTGCTTCGGAGGGTGTCGTTAGCTGAAGCCAGATTGTATGCGCAGATGTCTTACCTGGGAAATTTGGCATACTCTATACCCAAAATCCAGCCAGGGAACCTCTTAAAACCTTATGGACTGCGTTTTGTGACCTCATCACTAGAGAAGAAGGAATTGGCTTCAACAGCTGAAGACAACCAGGCATTAGTTGAAACTCAGGAAGTAGAAAAAActaatgagaatgaaaaagaagaaataaaggACCAGAAGAATAGTGGATCCAAGATTAGTGCATCTGCTGCTTATGAGATTGCTGCCTCTGCGGCCTCTTATCTCCATGCTCGTACCAAGAGCATACTTCCATTCAAATCCTCAAAAGATGGAAGTGGTGAAGAGTCGGTAGGAGGAAGCAGTGATAGTGATGATGGTGTTAACATGATAAACACAGAGGTAGCTTCTTTGATGGCAACAACTGATTCAGTGACAGCAGTGGTTGCTGCAAAGGAGGAAGTGAAGCAGGCTGTTGCAGATGATCTCAACTCTATTAGTTCATCACCATGTGAATGgttcatatgtgatgatgaCCAGAGTGGTACTAGATATTTTGTCATTCAGGGTTCTGAGTCCCTAGCATCCTGGCAAGCAAACCTACTTTTTGAGCCAATTCAATTTGAGGAGTTGGATATTCTTGTTCATAGAGGTATATATGAGGCTGCCAAAGGGATCTATCAACAGATGTTGCCAGAAGTTCATGCACACCTAAAATCCCAAGGTTCTCGCGCAACCTTCCGTTTCACTGGGCATTCTCTTGGGGGAAGCTTGTCATTACTTGTAAACCTCATGCTGCTAATAAGAGAGGAGGTGCCAATCTCCTCTCTGCTTCCTGTGATAACCTTTGGTGCTCCTGCTATCATGTGTGGAGGTGACAGATTGCTCGAAAAGCTCGGATTGCCTCGGAGTCATGTCCAGGCAATTACAATGCACAGAGATATAGTACCGCGAGCTTTTTCTTGCAATTACCCTAATCATGTCGCGGAGCTACTCAAGGCTGTTAATGGAAACTTCCGTTATCATCCTTGTCTTAATAACCAGAAGGTATTATATACTCCTATGGGTGAACTGCTAATTCTACAGCCAGAGGAGAAGTTTTCCCCAAGTCATCACCTCCTTCCCTCAGGCAGTGGTCTTTATCTTTTGTGTGGTTCATTCTCAGAATCCATTAGCATAGAAAAACAGCTCCGAGCTGCTCAGTTGGTGTTCTTGAACTCCCCACATCCACTTGAGATCTTAAGTGACAGATCTGCCTATGGCTCTGGCGGAACCATACAAAGAGATCATGACATGAATTCCTACTTAAAATCTGTGAGGAGTGTGATTCGCCAAGAACTAAACCGCATCCGCAGGAGAAGGAGGGAGCAGCGGCGGAAGGTGTGGTGGCCTCTTGTGGCTCCCCGTGGAGTTGATGCCGGCATTGTTGTTGGGAGATCGATGGTATCGGTGAATGTGGGGCAAGAACAGTCTGGGTTCTCTGGCATCATAAAAACAGGGAGAGAGTCATTGAAAAGGTTCAGTAGGCTTGTTGCATCCCAACATATGCATTTGGTTGTGGTGCTTTTGTTCCCTGCACGATTATTGCTGTTGGGAGCATATAGCACTATCAGTTTCCGTTGA 2184 0.4574 MDTLCFKGGISGIPPSISISGSLDARTNPSQVSAVGRPSTEKSPQKSVFSRFSFKYPLRSFWPGGGGNTRHNGLAIDDAVSVEDGEGKAVVQEDCENGDTCPEGQNGNWVLKILHVNSLWRGEQGNGANGGVEGIEEEGVANDQRKGSESDNEELCDACNIDDDHTEDVQFDRDSFSRLLRRVSLAEARLYAQMSYLGNLAYSIPKIQPGNLLKPYGLRFVTSSLEKKELASTAEDNQALVETQEVEKTNENEKEEIKDQKNSGSKISASAAYEIAASAASYLHARTKSILPFKSSKDGSGEESVGGSSDSDDGVNMINTEVASLMATTDSVTAVVAAKEEVKQAVADDLNSISSSPCEWFICDDDQSGTRYFVIQGSESLASWQANLLFEPIQFEELDILVHRGIYEAAKGIYQQMLPEVHAHLKSQGSRATFRFTGHSLGGSLSLLVNLMLLIREEVPISSLLPVITFGAPAIMCGGDRLLEKLGLPRSHVQAITMHRDIVPRAFSCNYPNHVAELLKAVNGNFRYHPCLNNQKVLYTPMGELLILQPEEKFSPSHHLLPSGSGLYLLCGSFSESISIEKQLRAAQLVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLKSVRSVIRQELNRIRRRRREQRRKVWWPLVAPRGVDAGIVVGRSMVSVNVGQEQSGFSGIIKTGRESLKRFSRLVASQHMHLVVVLLFPARLLLLGAYSTISFR 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3680 727 MobiDBLite consensus disorder prediction 231 263 - -
Sto13g3680 727 MobiDBLite consensus disorder prediction 138 153 - -
Sto13g3680 727 MobiDBLite consensus disorder prediction 293 314 - -
Sto13g3680 727 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 38 724 - -
Sto13g3680 727 Coils Coil 243 263 - -
Sto13g3680 727 MobiDBLite consensus disorder prediction 246 262 - -
Sto13g3680 727 Pfam Lipase (class 3) 373 510 IPR002921 GO:0006629
Sto13g3680 727 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 38 724 IPR043367 GO:0008970
Sto13g3680 727 SUPERFAMILY alpha/beta-Hydrolases 355 542 IPR029058 -
Sto13g3680 727 Gene3D alpha/beta hydrolase 316 541 IPR029058 -
Sto13g3680 727 MobiDBLite consensus disorder prediction 21 46 - -
Sto13g3680 727 CDD Lipase_3 356 512 - -
Sto13g3680 727 Coils Coil 627 647 - -
Sto13g3680 727 MobiDBLite consensus disorder prediction 128 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3680 Sto-Chr13 38861651 38864889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3680 1 727 Acyl Lipid Metabolism Gene Families AT1G02660 60.000 0.0 786
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3680 - - gmx:100807834 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0435 8 2709996 2712892 Sto13g3680 13 38861651 38864889 CCT
Sto13g3680 13 38861651 38864889 Sto13g3680 13 38861651 38864889 ECH