Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3669 ATGAAGACAAGCAAGGGCCAAAAAGGTCAAGCAGAAGCCCAGGAGAGAAGAAATACAGAGCGCGAGGCATTGGAGGAAGAGCACCATAGTGGCATAGCCAAAGGAGGACTAGAAAGCGTGACGGTTCGCATGCTTCCACCGACCATCCCTTTTCATGGATTCCTCTTCTTCGCTGTCCTCCGCTTTCTCACTCCTCAAATTCGCTTCGCACCCACGtccaagaagaaaaagaagagaaaggggTTTTTCGGCGTCACAATGTTGTGGGTTTTGAGATTCTCGGGGTTCTTCTCCGCCGCAATGGTTATGATAATTCTCTCTCCATCTCTGCAATCATTTCCTCCGGCGGAAGCCATTCGATCCTCCCACCTCGACCACTATCTCCGTCTACCGGTCCAGATGCCCCAGGCCAATAGCGAGAACCGATTTTTCTTCCGGAGATCCTCTGCATTCCGCAATGCCGATGAATGTGGTTCGAATCAAAAGGGGATTTCAGGGGAAACGAGTATTTGTGACCCTTCGTTGGTACACGTGGCGATTACTCTGGACATTGAATACTTGCGGGGTTCAGTTGCTGCAGTGCACTCCATCCTTCAGCATTCGTCGTGCCCGGAGAGCATCTTCTTTCACTTCCTTGTGTCGGAGACGAATCTGGAGTCATTAGTTCAATCCACGTTCCCCAATCTCAAGTTCAAGGTGTATTACTTCGATCCAAAGAGAGTAAAGAACCTGATCTCCACGTCTGTGAGGCAAGCGCTTCAACAACCCCTCAATTACGCAAGGAATTACTTGGCGGACCTTCTGGTGAGTTGCGTTGAGAGAGTCATTTACTTGGACTCTGATCTAGTCGTGGTCGACGATATTTCCAAACTGTGGAGCACCAGCTTGGGTTCTAGAACAATCGGAGCTCCGGAATACTGTCACGCTAACTTCACCAAGTATTTCACGGCGGCATTTTGGTCGAACCGGCGGTTCTCTGCCACCTTTGCGCGGCGGAAATCGTGCTACTTCAACACGGGAGTGATGGTGATGGATCTAGTGAAATGGAGGATAGGCGGGTACACGAAGCGGATCGAGAGGTGGATGGAGATCCAGAAGAGTGATCGGATCTACGAGCTGGGTTCTCTGCCGCCGTTCCTGCTGGTATTTgctggacacgtggcaccgatTGAGCATCGGTGGAACCAACACGGCTTGGGTGGTGATAACATCAAGGGCAGCTGTCGAGACTTGCACCCAGGTCCGGTTAGCCTTTTGCATTGGTCCGGTAGCGGCAAGCCCTGGCTCAGGCTTGACTCCAAACGCCCCTGCCCTCTCGATGCTCTATGGGCGCCCTATGATTTGTACGGACACTCATTGAACCATACATGA 1371 0.4989 MKTSKGQKGQAEAQERRNTEREALEEEHHSGIAKGGLESVTVRMLPPTIPFHGFLFFAVLRFLTPQIRFAPTSKKKKKRKGFFGVTMLWVLRFSGFFSAAMVMIILSPSLQSFPPAEAIRSSHLDHYLRLPVQMPQANSENRFFFRRSSAFRNADECGSNQKGISGETSICDPSLVHVAITLDIEYLRGSVAAVHSILQHSSCPESIFFHFLVSETNLESLVQSTFPNLKFKVYYFDPKRVKNLISTSVRQALQQPLNYARNYLADLLVSCVERVIYLDSDLVVVDDISKLWSTSLGSRTIGAPEYCHANFTKYFTAAFWSNRRFSATFARRKSCYFNTGVMVMDLVKWRIGGYTKRIERWMEIQKSDRIYELGSLPPFLLVFAGHVAPIEHRWNQHGLGGDNIKGSCRDLHPGPVSLLHWSGSGKPWLRLDSKRPCPLDALWAPYDLYGHSLNHT 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3669 456 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 177 437 IPR029044 -
Sto13g3669 456 MobiDBLite consensus disorder prediction 1 30 - -
Sto13g3669 456 Pfam Glycosyl transferase family 8 177 430 IPR002495 GO:0016757
Sto13g3669 456 SUPERFAMILY Nucleotide-diphospho-sugar transferases 176 450 IPR029044 -
Sto13g3669 456 PANTHER HEXOSYLTRANSFERASE 93 452 - -
Sto13g3669 456 MobiDBLite consensus disorder prediction 9 30 - -
Sto13g3669 456 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 93 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3669 Sto-Chr13 38805496 38807454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3669 87 451 Glycosyltransferase AT3G62660 77.534 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3669 - - jre:108994142 634.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0446 8 2766923 2768026 Sto13g3669 13 38805496 38807454 CCT
Sto13g3669 13 38805496 38807454 Sto13g3669 13 38805496 38807454 ECH