Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3590 ATGGATAGAGTAAGGGATTTAGCATCAAATAAGGCTGCTGTTATATTTACAAAGAGCTCATGTTGCATGTGCCACAGCATCAAGCAACTGTTCTATGAGCTTGGAGCAAGCCCTGCAGTGCATGAGCTTGACGCCGATGCGTATGGGAGGGAAATGGAGAAGGCTTTGAGGGGCCTGGGTTGTAACCCTTCTGTCCCAGCAGTGTTCATTGGAGGAAAATTTGTGGGCTCTGCAAAAGATGTCATATCCCTTCATGTTGATGGTTCTCTCAAGCAAATGCTCATAAATGCTAAGGCCATATGGTTAGCATCAGAAAAGGGGGTGGTGATATTCAGCAAGAGCTCGTGTTGCCTGTGCTATGCAGTGAACATTCTGTTTCAAGAACTGAAGGTGAATCCAGTGGTTCATGAAATCGATCAAGACCCTGAAGGCAGGGAAATGGAGAAAGCTCTGATGAGGTTGGGGTGTACTGCACCTGTTCCAGCTGTTTTCATCGGAGGCAAACTTGTGGGCTCCACCAACGAAGTCATGTCCCTTCACCTAAGTGGCTCTCTCGCTCAACTCCTCAAACCTTACCAACCTAATCTTTCTTAA 594 0.468 MDRVRDLASNKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDADAYGREMEKALRGLGCNPSVPAVFIGGKFVGSAKDVISLHVDGSLKQMLINAKAIWLASEKGVVIFSKSSCCLCYAVNILFQELKVNPVVHEIDQDPEGREMEKALMRLGCTAPVPAVFIGGKLVGSTNEVMSLHLSGSLAQLLKPYQPNLS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3590 197 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Sto13g3590 197 PANTHER GLUTAREDOXIN-C1 PROTEIN 102 189 - -
Sto13g3590 197 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
Sto13g3590 197 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Sto13g3590 197 PANTHER GLUTAREDOXIN 102 189 IPR011905 -
Sto13g3590 197 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Sto13g3590 197 CDD GRX_GRXh_1_2_like 12 93 - -
Sto13g3590 197 TIGRFAM GlrX-like_plant: glutaredoxin-like family 102 193 IPR011905 -
Sto13g3590 197 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 102 IPR011905 -
Sto13g3590 197 Pfam Glutaredoxin 14 75 IPR002109 -
Sto13g3590 197 Pfam Glutaredoxin 108 170 IPR002109 -
Sto13g3590 197 Gene3D Glutaredoxin 103 195 - -
Sto13g3590 197 Gene3D Glutaredoxin 1 102 - -
Sto13g3590 197 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Sto13g3590 197 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Sto13g3590 197 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Sto13g3590 197 ProSiteProfiles Glutaredoxin domain profile. 96 196 - -
Sto13g3590 197 SUPERFAMILY Thioredoxin-like 102 192 IPR036249 -
Sto13g3590 197 CDD GRX_GRXh_1_2_like 108 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3590 Sto-Chr13 38343890 38346274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3590 102 190 Miscellaneous Gene Families AT4G15690 55.056 1.35e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3590 K03676 - gmx:100819447 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g3590 13 38343890 38346274 Sto8g0518 8 3192601 3192924 CCT
Sto13g3590 13 38343890 38346274 Sto13g3590 13 38343890 38346274 ECH