Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3516 ATGCTGCTAAGGAACAGATCAAGAGCAGTGACGAAGCCAGGTTTAATGGCGGATCACACCTCTCACAGACAAAACTACTGCGCCACATCAGCACCTATTCCATCCTTGTTTGGTTCTCCAAAATTTAGAGAATTGAGCACCAAGTGTGTGTGTGCATCCGGATTTGAGGCTTTCACTTTGAGAACCCCAACTTCAATTCTTGATTCCAGAGCACTCAATCAATTATCCTTATCCCCCATCGGATTCTCCCATCAACCCATCCCTATCTCCTCCAAAGGCCTTGCTCTTCTCACTTCACTCCAAATTCAACAAAACTCAAATGTCTTGTTTGGGACACagcttggagttaaaatcccaACCCCTCCTTCTTCCAAAGAGGGTCAAAGTGTTATGTGTTGGAGCGAGATGGAGAATTGTGAGGAGTATACTTGTGTCAAATCCCGTGGCCCTAATCCAACAACCACTCATATATTCCATAATTGCATTATTCTGATACACACTACTCCTCATCACAACACCTACTCTTCTTCTGACTCTGCTTCCACCACCACTACTTATTTCCTCACCTTCTGTTATACCTGCAAGATCCACCTTGATCACACTAAGGACATCTTTATCTATAGAGGTGAGAAAGCTTTCTGCAGTGAGGAATGCCGATACAGAGAGATGGTAttagatggagaagaagaaagttCAGAATTTGACAGTAATGGTCATGCTTCTTCACTCTGA 732 0.4139 MLLRNRSRAVTKPGLMADHTSHRQNYCATSAPIPSLFGSPKFRELSTKCVCASGFEAFTLRTPTSILDSRALNQLSLSPIGFSHQPIPISSKGLALLTSLQIQQNSNVLFGTQLGVKIPTPPSSKEGQSVMCWSEMENCEEYTCVKSRGPNPTTTHIFHNCIILIHTTPHHNTYSSSDSASTTTTYFLTFCYTCKIHLDHTKDIFIYRGEKAFCSEECRYREMVLDGEEESSEFDSNGHASSL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3516 243 ProSiteProfiles Zinc finger FLZ-type profile. 186 230 IPR007650 -
Sto13g3516 243 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 2 122 - -
Sto13g3516 243 PANTHER ZF-FLZ DOMAIN-CONTAINING PROTEIN-RELATED 127 230 - -
Sto13g3516 243 PANTHER FCS-LIKE ZINC FINGER 8 127 230 IPR044593 -
Sto13g3516 243 PANTHER FCS-LIKE ZINC FINGER 8 2 122 IPR044593 -
Sto13g3516 243 Pfam zinc-finger of the FCS-type, C2-C2 178 228 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3516 Sto-Chr13 37909581 37910401 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3516 - - gmx:100800416 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0619 8 3811847 3812778 Sto13g3516 13 37909581 37910401 CCT