Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3506 ATGGGAGATGACAACTCCAAGAAAAGCAAGCTTTCGTGGCCCAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAACCGAGGATTTTCAGGCAGACCATATTATTTATGGAGGTGTGGATGAAGAGTGGAGGAGCAACTACACAGAGAGGGAAGCATGCACTATCAAGAAAAGCAAAACAGAGCGATCAAGCAGGAGGCACTTGGACAGAGTGCGCCAAGGTATGATTGACCTTGACACAGATGAGGTTACAGAAGTGAATAATTATAGAATTTTTGTTGCTACTTGGAACGTAGCTGGGAAATCTCCTCCTGGTTATTTGAACCTTGAAGATTGGCTTCATACCTCTCTGCCTGCTGATATTTATGTTCTCGGGTTTCAAGAAATTGTGCCTCTTAATGCTGGTAACGTTTTGGGCACAGAAGATAATGGCCCTGCAAGAAAATGGCTAGCTCTTATTAGGAAGACCCTAAACAGTCTCCCTGGCACAAGTGGTGGATGCCACACTCCTTCTCCAGTCCCTGATCCTATTGTAGAATTAGACTCTGACTTTGAGGGATCAACGAGGCAGAAGGCGGCCTCTTTCTTCCACCGGAGATCCTTCCAATCCTTGAGTCGTAGTATGAGAATGGACAATGACATGTCACTCCCACAAGCACGACTTGATCGCCGCTTCAGTGTCTGTGATAGAGTGATATTTGCTCATAGGACAAGTGATTATGACCCTAGTTATAGATGGAATTCCTCAGATGATGAAATCGGGCTGGGTGATTCCCCCGGAACACAATATTCACCCTTGTCACATTGTGGTTCTTTTTCCATGGAGGACAGAGATAGGCAGACAGGGCACTCAAGATACTGTTTGGTTGTCAGTAAGCAAATGGTAGGGATATTTCTAACAGTTTGGGTGAAAAGTGATATTAGAGATTATGTTCGCAACATGAAAGTCTCTTGTGTTGGCAGAGGATTGATGGGTTATCTTGGAAATAAGGGTTCAATTTCAATTAGCATGTCCTTGCACCAAACAAGCTTTTGCTTCGTCTGTAGTCATTTGAGTTCTGGACAAAAGGAAGGTGATGAGCTGAGGAGAAATTCAGATGTGATGGAGATTCTCAGAAAGACCAGGTTTCCGCAGGTCCATGGCATTGGTGATGAGAATTCTCCTCAGACAATTCTGGAACATGATCGGATAATTTGGCTGGGGGATTTAAATTACCGGATAGCCCTTTCCTACCGTGTGGCAAAAACTCTTGTTGAGATGCGGAATTGGAAGGCTTTGTTAGAGAAAGATCAGGCATGcttatttaaatttatctttCAGCTGCGTATAGAGCAAAGGCAAGGTCGTGTGTTTGAAGGATGGAATGAAGGGAAGATATATTTCCCTCCCACATACAAGTATTCAAATAACTCTGACAGATATGCAGGCGACGAAAGACACTCAAAACAAAAGCGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGAGGCCTCCACCAATTATCTTATGTTCGCGGAGAATCAAGATTCTCTGATCATAGACCAGTTTATGGCATATTCCTGGCAGAGGTTGATTCTGTTAACAGTAGCCGAAACAAAAAGAACTTCAGTTCCAGAATTGAAATAGAAGAGTTGCTGCCACATCCACATGGATTTAGTTATGCTGAATTAAATCTCTTCTGA 1698 0.4299 MGDDNSKKSKLSWPKTLVKKWFNIKSKTEDFQADHIIYGGVDEEWRSNYTEREACTIKKSKTERSSRRHLDRVRQGMIDLDTDEVTEVNNYRIFVATWNVAGKSPPGYLNLEDWLHTSLPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGGCHTPSPVPDPIVELDSDFEGSTRQKAASFFHRRSFQSLSRSMRMDNDMSLPQARLDRRFSVCDRVIFAHRTSDYDPSYRWNSSDDEIGLGDSPGTQYSPLSHCGSFSMEDRDRQTGHSRYCLVVSKQMVGIFLTVWVKSDIRDYVRNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFVCSHLSSGQKEGDELRRNSDVMEILRKTRFPQVHGIGDENSPQTILEHDRIIWLGDLNYRIALSYRVAKTLVEMRNWKALLEKDQACLFKFIFQLRIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWYGRGLHQLSYVRGESRFSDHRPVYGIFLAEVDSVNSSRNKKNFSSRIEIEELLPHPHGFSYAELNLF 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3506 565 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 559 - -
Sto13g3506 565 Pfam Endonuclease/Exonuclease/phosphatase family 96 518 IPR005135 GO:0003824
Sto13g3506 565 SUPERFAMILY DNase I-like 75 541 IPR036691 -
Sto13g3506 565 Gene3D Endonuclease/exonuclease/phosphatase 68 551 IPR036691 -
Sto13g3506 565 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 559 IPR045849 GO:0004445|GO:0046855
Sto13g3506 565 SMART i5p_5 225 533 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3506 Sto-Chr13 37881324 37884031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3506 293 549 Acyl Lipid Metabolism Gene Families AT2G43900 28.041 3.49e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3506 - - vvi:100852714 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0626 8 3850178 3851736 Sto13g3506 13 37881324 37884031 CCT
Sto13g3506 13 37881324 37884031 Sto13g3506 13 37881324 37884031 ECH