Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3424 ATGTTTAGCAGGCCAAGAGGAGCAAGTGCTTTTGGTATATTCAAATGGAAATTTCATGGTGAATCATCTCTGAAATCAGGTTTGCTTCTAGATGTTCCTCCAGAGATTGAATTGTCTGACTATGGAAGGAGCCCAAGTCAAGGAAGTGAGAGCCCTTCGGGGCTTCTTAATGGTGAGAGCTTAAATGTTGAGCCAATTGCTGATTTGGACCTCTTCTTTGAAAGAGTTTATAGCTACTACTGTGAGAAAGGGCTTTGGTGCATCATTGTTAAGTGGGTTGTTGAACTTCTAAGTCTAGGTTTCACCATTTGTTTTTCTggcttctttttattatatgttgATTGGAATGGGCTTCGCAATGCCAAGTGTGGGATGAATGCAGTTGAATCTGGAATTAAGCCCTGTGATCTAGCAAAAGAAGCTCTTCATCAACACCCATTAACCCCACTAACATTTACTAAATTTATTATTCTTGGATACTTGGGAATATTCTCTGTCTATTGGATATTTTGTTTCTTGAGATTCTTTTCTCAGCTAAAGGATACTCTGGAAATCCGTCAGTTTTATTATAACAGTCTCCATGTTACTGACAATGAAATTCAAACAATGCCTTGGGCAACAATTCTTGAAAAGGTTTTTTTGGTACAAAGTTCACGACAGCTCTGTGTGGTTAAGGAACTTTCTGCTCATGACATGATGATGAGATTGATGCGGAAGGAGAACTACTTGATCGGAATGCTCAACAAGGGGGTACTTGCTTTCCCCATTTCTCAGTGGGTTCCTGGTGCTGGTCCTGCAGTGAAATCCAGTCCTAATGGTACACAATATTGTCTAATACTTACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTCTGTGTTAGGAGGGACTTTGTATCTAATCCGAAGGCATTAAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTTCTTGTTATATTCATGATGGTATATCTCTTTCTGAGGCATGCTGAACAATTTTATAATCATCCGAGCATAGCTTCATCTCGAAGATGGTCAAATTTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGAACATCTCTTCAAGCATCGCATCAATAACAGTGTAGTACATGCTTCTGATTATCTCAATCAATTTCCTTCACCTATCATATCTATCATTGCAAAGTTCATCACTTTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTTGAGGAATCTCTGTTAGAGGGCCATaTATTTGGTCGAAACTTGTTTTGGTATGCTGCTGTTTTTGGAACCATAACTGCAATTAGCCGGGCTGCAGTGACAAATGAGCTTCTTGTCTTAGATCCTGGGGGAGCAATGTCTATGGTGGTTCAACATACCCACTATATGCCAAAAAGATGGCGAGGCAAAGAAAGTACTGAGATGGTCCGCATTGAGTTTGAAACCTTGTTTCAGTATACTGGGATGATGTTACTTGAGGAGATGGCCTCAATTTTCCTCACTCCATATTTACTTTTGTTTGTTGTTCCAAAGCGGGTTGATGATATTTTGCAGTTCATTGCAGATTTCACAGTGAATGttgaaggtgttggccatgttTGCAGTTTTAGCACCTTTGACTTTCAAGGGCATGGAAACAGCAATTATGGTTCCCCACACAATGCACCCCGCAGCCAAAGGAGTTGTCAGGGGAAAATGGAGAAATCATTTTTGAGCTTTCAGAGCAGTTACCCATCATGGGAACCAAATTCTCAGGGGAAGCAATTTTTGCTAAATCTTAGAACCTTTAGAGAGcaaaatttggaaggatttggaaACAGACATACATTGCCCCCTCCCAGATTGGGGAGGGGCAGTCCCAATATGAGGTACAATGGAGACAGAAACAGGTTTATTTCCAGGGAAATGCCATATGTAACTGGCCATCACTTGGGTTCATTGTGGCTGATTGATGCCAATCAAAACAATCATCCTTATCTTCTAGATTGGTACTATACTTCACGACCTCATTATGCAACTATGAGAGAAGTTCCAACAGAACCATTTGAAGAATCTGAGTTCCATTCCGGAGAGTATAGAATGCACTCCAACTTGACTCGGAATGATCCTGGGTATGAAGATTACCTAAACGAGTATTGCAAAGATCGGGCCACGTCTCATCTTGGAGCTTCTACGTTGGGTCCCATCTTCAGGGAAAGCCTGATTCAGAATCACAACTTTACTGATCGCTCCCACTCTATGAGGAGTCATTGGTGGGCAAGAAGTGGCCCCCAGGTTGGACAGGCTCAGACAAGCTTTTATGAGCCTCCAGATTTTAATCAAGGAATATCATATAATTATTATGACAAGTTTTCTGATAGAGGGTCGGTGGATCATGAACAACACTTGGACTGGAGAGATGATCACAGATTATCTAGAACAGTTTGCACAGATGACTTGGAGACAGGAGACTTCAATCTTCattttgatgatatatatagcACACGTCCATAA 2544 0.3998 MFSRPRGASAFGIFKWKFHGESSLKSGLLLDVPPEIELSDYGRSPSQGSESPSGLLNGESLNVEPIADLDLFFERVYSYYCEKGLWCIIVKWVVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMNAVESGIKPCDLAKEALHQHPLTPLTFTKFIILGYLGIFSVYWIFCFLRFFSQLKDTLEIRQFYYNSLHVTDNEIQTMPWATILEKVFLVQSSRQLCVVKELSAHDMMMRLMRKENYLIGMLNKGVLAFPISQWVPGAGPAVKSSPNGTQYCLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKALKKRLMVVGLAMLLLSPFLVIFMMVYLFLRHAEQFYNHPSIASSRRWSNLSRWIFREFNEVEHLFKHRINNSVVHASDYLNQFPSPIISIIAKFITFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAVTNELLVLDPGGAMSMVVQHTHYMPKRWRGKESTEMVRIEFETLFQYTGMMLLEEMASIFLTPYLLLFVVPKRVDDILQFIADFTVNVEGVGHVCSFSTFDFQGHGNSNYGSPHNAPRSQRSCQGKMEKSFLSFQSSYPSWEPNSQGKQFLLNLRTFREQNLEGFGNRHTLPPPRLGRGSPNMRYNGDRNRFISREMPYVTGHHLGSLWLIDANQNNHPYLLDWYYTSRPHYATMREVPTEPFEESEFHSGEYRMHSNLTRNDPGYEDYLNEYCKDRATSHLGASTLGPIFRESLIQNHNFTDRSHSMRSHWWARSGPQVGQAQTSFYEPPDFNQGISYNYYDKFSDRGSVDHEQHLDWRDDHRLSRTVCTDDLETGDFNLHFDDIYSTRP 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3424 847 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 847 - -
Sto13g3424 847 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
Sto13g3424 847 MobiDBLite consensus disorder prediction 620 639 - -
Sto13g3424 847 PANTHER APG9 AUTOPHAGY 9 1 847 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3424 Sto-Chr13 37354641 37359030 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3424 K17907 - gmx:100777405 1379.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0692 8 4336299 4341396 Sto13g3424 13 37354641 37359030 CCT
Sto13g3424 13 37354641 37359030 Sto13g3424 13 37354641 37359030 ECH