Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3311 ATGTTCGTGGGGACGTGGAATGTTGGAGGAAAGTCACCGAATGATGGCTTGAACTTGACGGACTGGCTCAATTCTCCTTCACCAGCTGACATCTATGTCATTGGGTTCCAAGAAATTGTGCCTCTAAATGCAGGGAACGTGCTTGGGCCGGAGGACAGTGGGCCAGCGGCCAAGTGGCTGTCCCTCATTCGTCAAGCTTTGAACTCCAACAATAATACCATGAAGATAAGGACCAGCTTCTCGGACTTGCTGGGTTTAGAATTAGAAGACGAGTTTGAGGAGCAGCCACGGTATTGTCTAGCAGCCAGCAAGCAAATGGTGGGTATCTTCTTGTGCGTCTGGGTTCGAGCCGATCTATACAAACATCTTTCCAACTTAAAGGTGTCCTGTGTTGGCAGAGGCATCATGGGTTATCTTGGAAACAAGGGTTCAATATCAATTAGCATGACATTACACCACACTACGTTCTGTTTTGTCTGTACCCACTTAACGTCTGGGGAGAAAGATGGTGATGAGGTTCGAAGAAACTTGGACGTGTCTGAGATTTTGAAGAAAACTAAATTTTCTCAATCATTTAAATCTCTTGATCATCCAAGTAAGATTATTTGGCTGGGGGATTTGAACTATCGGTTGGCTTCTGGTTATGATGATACACATGAACTACTAAAGAAGAATGATTGGCAGGCACTGTTAGAAAAAGATCAGCTAAGGATAGAGCAGAGAGCTGGTCGAGTATTTCAAGGTTGGAAGGAAGGCGAAATATATTTTGCTCCTACTTACAAATACTTTGACAATTCTGACCACTATGTTGTCCGAAACTCCAAGTCCAAGATAAAACAACGAACTCCGGCTTGgtGTGACCGGATTCTGTGGAAAGGAGAAGGGGTAAAGCAGATGTGGTATGTGCGAGGAGAATCGAGATTCTCAGACCACAGGCCTGTGTGCTCACTATTCTCAGTTCAGGTGGACAAAGCAAGGACAAGGACAAGCAAGAATAATCTGAGTCCAACGTCAACATCAATGACAAACGCTGCCTTATCATCTAAAGTTCAGGCAGAAGAGCATCTCTTGTTACTAACAAGGGTACAAAGTTGTATTCACAGTGCACCCAGGTTCTGA 1119 0.445 MFVGTWNVGGKSPNDGLNLTDWLNSPSPADIYVIGFQEIVPLNAGNVLGPEDSGPAAKWLSLIRQALNSNNNTMKIRTSFSDLLGLELEDEFEEQPRYCLAASKQMVGIFLCVWVRADLYKHLSNLKVSCVGRGIMGYLGNKGSISISMTLHHTTFCFVCTHLTSGEKDGDEVRRNLDVSEILKKTKFSQSFKSLDHPSKIIWLGDLNYRLASGYDDTHELLKKNDWQALLEKDQLRIEQRAGRVFQGWKEGEIYFAPTYKYFDNSDHYVVRNSKSKIKQRTPAWCDRILWKGEGVKQMWYVRGESRFSDHRPVCSLFSVQVDKARTRTSKNNLSPTSTSMTNAALSSKVQAEEHLLLLTRVQSCIHSAPRF 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3311 372 Pfam Endonuclease/Exonuclease/phosphatase family 4 311 IPR005135 GO:0003824
Sto13g3311 372 Gene3D Endonuclease/exonuclease/phosphatase 1 349 IPR036691 -
Sto13g3311 372 SUPERFAMILY DNase I-like 1 324 IPR036691 -
Sto13g3311 372 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 1 360 - -
Sto13g3311 372 SMART i5p_5 1 326 IPR000300 GO:0016791|GO:0046856
Sto13g3311 372 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 1 360 IPR045849 GO:0004445|GO:0046855
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3311 Sto-Chr13 36660359 36662626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3311 1 334 Acyl Lipid Metabolism Gene Families AT1G65580 28.426 4.57e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3311 - - aprc:113870745 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0817 8 5161856 5164747 Sto13g3311 13 36660359 36662626 CCT