Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3307 ATGGAGTCTCTGCCTAAACTTCACCACTGTCACCAACCGCTTCACCTCTCGCTCAGTCACCACCCTTCTTCATTATCAAGACCCTTATCTTCCGTCTCCTTCAGGTCACTACCACCTCCGGTCTCACCGCCGCAATTTTCGTCTTCGTCCTTCAGGTTATCATCAATTAGAGCCGCGTCCTCGTCGTCAGACTCTGCCACCAACCATGCTTTCCATAAACCCAGAAGCATTTCAACCCAGttgctccaaaccctaaaccctctttTTTCACCTGTCGTCGAAACCACCTGTACTATCGTAGTAGCGGCAGTGTTTTTCTTCATGCGTGTTCAACACAAGCCCGCCATTGCTGCCCCGCTTGTGCCACCCACGGTGGAGTCTACTACTACGGAGTCGATGGAAAATTCTCCgaatgaagagagagagagaattattGAAGAGCAATTAAGTAACAATCCCAATGATACCGAAGCTCTTAGGTCTCTCATCGAGCTCAAGCTTAGAGCGCGCAAGGTTGACGAGGCAATTCAGGTCATAGACCGTTTGATTGAACTCGAACCTGAAGAGTTTGAGTGGCAGCTGTTGAAGGCTCACATGTATTTCTATAACGGTGACTACGAATTGGCCAAGGATAGGTTTGAAGATATTCTAACTAAAGATCCTTATCGTGTCGAAGCTTATCATGGTCTTGTAATGGCTGCTTCGGAGTCCAATAAGCCATTGGAGGATTTGTTGAAGAGGGTTGAAGAAGCTGTGGCATTTTGCAAAAAGCAAAAGAGGGGTTCAGAAGTCAGGGACTTGAAGCTCTTGATAGCGCAGATTAAAGTCATGGAGGGAGACTTTCCTGATGCACTGAAGGCCTATCAGGAGCTTGTGAAGGAAGAACCAAGAGATTTCAGACCATATCTATGTCAGGGTATCATATATACTATTCTAAGAAAAAAAGATGAAGCCGAGAAACAATTTGACAAGTTCCGGAGGCTTATCCCGAAGAACCATCCTTATAGAGAGTATTTTGAGGACAATATGTTTGCAACGAAGAATTTTCCCCAGAACGTAGAGAGGGAAAGATCAGGTGCGAATAGCTGA 1089 0.4399 MESLPKLHHCHQPLHLSLSHHPSSLSRPLSSVSFRSLPPPVSPPQFSSSSFRLSSIRAASSSSDSATNHAFHKPRSISTQLLQTLNPLFSPVVETTCTIVVAAVFFFMRVQHKPAIAAPLVPPTVESTTTESMENSPNEERERIIEEQLSNNPNDTEALRSLIELKLRARKVDEAIQVIDRLIELEPEEFEWQLLKAHMYFYNGDYELAKDRFEDILTKDPYRVEAYHGLVMAASESNKPLEDLLKRVEEAVAFCKKQKRGSEVRDLKLLIAQIKVMEGDFPDALKAYQELVKEEPRDFRPYLCQGIIYTILRKKDEAEKQFDKFRRLIPKNHPYREYFEDNMFATKNFPQNVERERSGANS 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3307 362 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 342 - -
Sto13g3307 362 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 342 - -
Sto13g3307 362 SUPERFAMILY TPR-like 145 338 IPR011990 GO:0005515
Sto13g3307 362 Gene3D Tetratricopeptide repeat domain 119 352 IPR011990 GO:0005515
Sto13g3307 362 Pfam Tetratricopeptide repeat 274 330 - -
Sto13g3307 362 ProSiteProfiles TPR repeat profile. 265 298 IPR019734 GO:0005515
Sto13g3307 362 ProSiteProfiles TPR repeat profile. 156 189 IPR019734 GO:0005515
Sto13g3307 362 SMART tpr_5 265 298 IPR019734 GO:0005515
Sto13g3307 362 SMART tpr_5 156 189 IPR019734 GO:0005515
Sto13g3307 362 SMART tpr_5 299 332 IPR019734 GO:0005515
Sto13g3307 362 SMART tpr_5 190 223 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3307 Sto-Chr13 36639179 36640267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3307 - - gmx:100778644 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0824 8 5205642 5206730 Sto13g3307 13 36639179 36640267 CCT