Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3296 ATGAATGTGGTGGGCAAAGTTGGAAGCCTGATTACCCAAGGTGTCTACTCAGTTGCTACCCCTTTTCATCCCTTTGGTGGGGCTGTTGATGTGATTGTTGTTCGGCAGCAAGATGGGACATTCCGAAGCACGCCGTGGTATGTCCGGTTTGGTAAATTTCAGGGTGTTCTCAAGGGTGCTGAAAAGATTGTCCGTATAAATGTTAATGGTGTTGAAGCAAACTTCCACATGTACCTTGATAATTCAGGGGAGGCGTACTTTGTAAAGGAGGTGGATGATGATAAAGGAATGGAGTCCAATGGAAGTGTTAAAGACCCTAATAATTCTGCATTTACTAGAGTGGACAGTGGTATGCATATTGATGATGCTCACAATTGGGCGTTTGATTTGAAAGATGAAGGTGATTCTTCAGGTGTGCCTCGAATTCAAAGGACAGAATCTGATTGTAGTAGGAGATATTATGATTTCCAAGATGAACAATCTTCTTTTGAAGGTTCAGTTGAATTGTCAGAATATCAGTCAAATCCATATGATGGTCTAGATGGAGAAAATTATTCTGACTCTCAGGGCTCTCATCCAGAAATGGTGTTGGTAAGTGTGGATGGTCATGTCTTGACAGCCCCTATCTCAGAATCAGAGCAGAATACGGACAATGTGCAATTAGTAACTCCTCAGTTCCATCTTGGCCCAGGTGACGGGACTGAGTTTTGTGAAGGCGATGACGAGTTCATTTCTGGTGAGAATGCCTGGGCTGATGATTATATAGGTCAGATAGATGCTTCATCAGCTCATGTTCCAACCAGAGGCCCCTGCAACACTAATGGTGATGGTAATGTTTTTGGGCTCCAGCCAGAGGTTAGTCAGGAAGAGGAGAAACATGTTCATCAAGCACAAGATACCTTGAGGATTGAAGGTCAAGATGATGGTCATCATATAGAAACTGATTCAGCCGATGTTGCATCTGGTATAAAAAAAGACAGTGTATTCAAAAGCTGTTTGGAGCTACAAGAGCTAGCTCAGCAGGTTGGAAATGCTGATGTACTACATACAGGTTCCTCATTGGGGGCTCAAAATTCAGCAGATGAATCTAACACTGAATGTCCAGTTGTTGATGAAAACGAACCAGGGAACCTTGCACAATCTAAATGCAATGATGAATTATCTCCTTCTGATGCTTCTGTATCTTCTGATAGCCATAAATCCTCAGAATTAAGATTTCAAGTGTTAGAGAAGAAGGAAACAGCAGAAATTGACATTGATTGTGGCAATCATTCTGTTACCAATGGGCTAGATGATATTCAACAGACCCCTGCACGTGAAAACGAAAGTAATAAAAGTGAGGTGGTGGAACCCCAAATAGCAGCATCCGATGAAGGAGGCCAGAGTCATTCAGGTTTGAGATTTGAGATCTCACTTTGTGGCCATGAGCTTAAGGCAGGTATGGGTTTAGGTGCTGCTGCTGAAGCATTTGAAGCACATCGGATATCTGCAGATGAATTTAAAGCTTCTTCACTATCCATAACTAAGAATGAAAATCTCATTATAAAGATCAAAGAGAGGTACTTGCCATGGGAAAAGGCCGCTCCTCTTGTTCTTGGAATGGCTGTGTTTGGTTTAGATTTACCTGTTGAGCCCAAAGATACAATTCCTGTGGAACAGGATGATGCACTGAAATCCAGGGGCAAAGATCAGGGATCTGCTTCGCCTGGACGTAGGTGGAGACTCTGGCCTATTCCTTTTCGAAAAGTCAAAACACTTGAGCACACTAGTAGTAACTCATCGAATGAGGATGTATTTGTGGATTCTGAATCTGGTTTTCAAAATTCTCTTGGAGAGCCAACTCCAACATCCAGCAGCCATAGATCTCCTCGCAAGCAATTAATAAGGACAAATGTACCCACTAATGATCAGATAGAATCTTTGAATCTAAATGAAGGTCAAAATTTGGTAACCTTCAGTTTCTCTACCAGGGTTCTTGGAGAACAACAGGTTGATGCTCATATATACTTGTGGAAGTGGAATGCAAGAATTGTAATTTCAGATGTTGATGGAACTATTACCAAGTCTGATGTGTTGGGACAGGTCATGCCTTTAGTTGGTAAAGATTGGACACAATCTGGAGTGGCAGGGCTTTTCTCAGCCATTAAGGAAAATGGATATCATTTACTGTTCCTGAGTGCCCGTGCAATTGTTCAGTCATATATAACCAGGAAGTTATTAAATAACGTGAAACAGGATGGCAAAGCATTACCAAATGGACCTGTGGTTATTTCACCTGATGGATTATTTCCCTCACTTTTCCGAGAAGTAATAAGAAGAGCACCCCATGAGTTCAAGATTGCTTGTCTAGAGGATATTAAAAGACTTTTCCCTGCTGATTATAACCCATTCTATGCGGGATTTGGCAATAGAGACACAGATGAACTTAGTTACAGGAAGATGGGAATTCCAAAGGGCAAAATATTCATTATCAACCCTAAGGGTCAGGTAGCTACAAGTCATCGTATCGATGTGAAATCCTATACATCATTACACACACTTGTCAATGACATGTTCCCCCCAACTTCTTTGATTGAGCAGTTGCAGGAAGATTTCAACTCGTGGAACTACTGGAGATTGCCATTGCCAGGAATTGACTAG 2640 0.4178 MNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVRQQDGTFRSTPWYVRFGKFQGVLKGAEKIVRINVNGVEANFHMYLDNSGEAYFVKEVDDDKGMESNGSVKDPNNSAFTRVDSGMHIDDAHNWAFDLKDEGDSSGVPRIQRTESDCSRRYYDFQDEQSSFEGSVELSEYQSNPYDGLDGENYSDSQGSHPEMVLVSVDGHVLTAPISESEQNTDNVQLVTPQFHLGPGDGTEFCEGDDEFISGENAWADDYIGQIDASSAHVPTRGPCNTNGDGNVFGLQPEVSQEEEKHVHQAQDTLRIEGQDDGHHIETDSADVASGIKKDSVFKSCLELQELAQQVGNADVLHTGSSLGAQNSADESNTECPVVDENEPGNLAQSKCNDELSPSDASVSSDSHKSSELRFQVLEKKETAEIDIDCGNHSVTNGLDDIQQTPARENESNKSEVVEPQIAASDEGGQSHSGLRFEISLCGHELKAGMGLGAAAEAFEAHRISADEFKASSLSITKNENLIIKIKERYLPWEKAAPLVLGMAVFGLDLPVEPKDTIPVEQDDALKSRGKDQGSASPGRRWRLWPIPFRKVKTLEHTSSNSSNEDVFVDSESGFQNSLGEPTPTSSSHRSPRKQLIRTNVPTNDQIESLNLNEGQNLVTFSFSTRVLGEQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQVMPLVGKDWTQSGVAGLFSAIKENGYHLLFLSARAIVQSYITRKLLNNVKQDGKALPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKRLFPADYNPFYAGFGNRDTDELSYRKMGIPKGKIFIINPKGQVATSHRIDVKSYTSLHTLVNDMFPPTSLIEQLQEDFNSWNYWRLPLPGID 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3296 879 PANTHER PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 879 - -
Sto13g3296 879 SUPERFAMILY HAD-like 669 819 IPR036412 -
Sto13g3296 879 Pfam LNS2 (Lipin/Ned1/Smp2) 631 853 IPR013209 -
Sto13g3296 879 Pfam lipin, N-terminal conserved region 1 95 IPR007651 -
Sto13g3296 879 PANTHER LIPIN 1 879 IPR026058 -
Sto13g3296 879 SMART lns2 677 833 IPR031315 -
Sto13g3296 879 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 468 576 IPR031703 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3296 Sto-Chr13 36571964 36577918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3296 K15728 - gmx:100798304 1219.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0831 8 5263105 5267760 Sto13g3296 13 36571964 36577918 CCT