Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3259 ATGGGGTCGCTAGAAAGATCAAAGAAGAGAATTCAGCTATGGAAGAAAGCAATGATccatttttctctttgttttgtgATGGGCTTCTTCACAGGTTTCGCTTCAACAGAAGCAGCTTCTCCCTCCAATACAACAAAAGCAGCATTTTCCCCACAGCCTATTGAAATTTCACAACACCACAACACAACAAATTTCAGTACAAGTTCGATGGCTCCAACGTCAAATGTCCCCAAACACAACACAAAGTTACATGTAAAAGCAGAGGCAAGTTTGATGAAGGCTAGAAGACACATCATCATTGTCACTCCAACAACCCCAAAACTAGCATTTCAAGAAGTGTGGTTGAGGAGGTTGGCCAATACCATAAACCTTGTTCCTCAGCCATTGTTGTGGATTGTTGTGGAACCACAAACGGAGTCCACACAGGTTTCGGAGATACTAAGGAAAACAGGAATCATGTACAGACATTTGGTGTCAAAGGAAAACTTCACGGATTTAGGAGCAGAGCTGAATCACCACAGAAATCTTGCTCTTAAGCACATTGAGCACCATAGGCTAAGTGGGATTGTTCATTTCGCTGACCTATCTAATGTCTATGATCTTGAGTTCTTCCACCAGCTTAGAGATATTGAGGTGTTTGGAACATGGGCAGTGGCATTATTAGCAGCAAACAGGAAGAAAGTAATAATCGAAGGGCCTGTTTGTGATTCTTCACAAGTCATAGGTTGGCATCTGAGGaacatgaataaaaataatgaaacaGATACTATAAATCCTCCCATTCATATTTCAAGTTTTGCATTCAATAGTTCAATCCTCTGGGATCCTGAAAGATGGGGTCGTACTTCCTCTGTTCAAGACACCTCTCAGAATTCAATCAAGTTCGTGAAGGAAGTTGTGCTTGAAGATGAATCAAAGTTAAATGGGATTCCACCAGAAGGTTGCTCCAGAATCATGCTCTGGCGTTTCAATTTTCATGCTACTACAACTTCAAAACATCAATTTCTAATTACTACTTCAGATAATAATCCCAGATAA 1038 0.3931 MGSLERSKKRIQLWKKAMIHFSLCFVMGFFTGFASTEAASPSNTTKAAFSPQPIEISQHHNTTNFSTSSMAPTSNVPKHNTKLHVKAEASLMKARRHIIIVTPTTPKLAFQEVWLRRLANTINLVPQPLLWIVVEPQTESTQVSEILRKTGIMYRHLVSKENFTDLGAELNHHRNLALKHIEHHRLSGIVHFADLSNVYDLEFFHQLRDIEVFGTWAVALLAANRKKVIIEGPVCDSSQVIGWHLRNMNKNNETDTINPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKEVVLEDESKLNGIPPEGCSRIMLWRFNFHATTTSKHQFLITTSDNNPR 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3259 345 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 332 - -
Sto13g3259 345 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 332 IPR005027 GO:0015018|GO:0016020
Sto13g3259 345 CDD GlcAT-I 98 325 IPR005027 GO:0015018|GO:0016020
Sto13g3259 345 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 97 343 IPR029044 -
Sto13g3259 345 Pfam Glycosyltransferase family 43 118 324 IPR005027 GO:0015018|GO:0016020
Sto13g3259 345 SUPERFAMILY Nucleotide-diphospho-sugar transferases 96 334 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3259 Sto-Chr13 36360073 36362276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g3259 1 329 Glycosyltransferase AT2G37090 58.286 1.02e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3259 K20869 - gmx:100803434 507.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0869 8 5509441 5510870 Sto13g3259 13 36360073 36362276 CCT
Sto13g3259 13 36360073 36362276 Sto13g3259 13 36360073 36362276 ECH