Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3175 ATGAAGCACCCAACTTTACTAATATTACTCACCATTTTCCTATATTATTCAACATTGAGTAGAGCGCAGGAAGTGGAGGATGAGAGAGAGTTTGATTACATAAAGGGAAGCGAGAAGGGGCCTTCGCACTGGGGAGAGCTTAAAAGGGAATGGGAAGCATGTCAAAAAGGAAGAATGCAATCTCCAATTGATTTGTGGAgtgagagagtgagagtgatCCCAAAGCTAGGCCAACTCAACAACACCTATAAGCCCCAAAATGCTACTCTCAAGAACAGAGGCCACGATATTGAGGTCAAATGGGAGGGAGATGCTGGTTCCATACCAATCAACGGCTCACATTTCTTCCTCCGACAATCCCACTGGCATTCACCTTCTGAACATACCATCAACGGCAGGAGGTGTGATTTGGAGCTACACATGGTTCATGTAAGGCCAAACCCAGAGGGAAGAGATAAGATCGCTGTTGTTGGACTTCTCTACAAGATTGGTCCTCCTGACCCTTTTCTCTCCAAGTTGGAAAAACACATGAGAGGGATGGTGGATATAAAAGGAGAAAAGAGCATAGGGGTGATTAATCCCTTGGACATCATCAAGATGGGTGGCAACAAGTATTACAGATATATGGGCTCCCTCACTGTCCCTCCTTGCACCCAAGGTGTCATTTGGACTATCAATAAAAAGATTAAAACTGTGTCAAGGGAGCAAGTGAAGTTGCTGAGAGAGGCAGTCCACGATTATGCAGAGAGGAATGCCAGACCAGTGCAGCCCCTTAATCGCCGAGAGATACATCTTTATTCCCCAAGGAATAAACCACATAATTAA 825 0.4388 MKHPTLLILLTIFLYYSTLSRAQEVEDEREFDYIKGSEKGPSHWGELKREWEACQKGRMQSPIDLWSERVRVIPKLGQLNNTYKPQNATLKNRGHDIEVKWEGDAGSIPINGSHFFLRQSHWHSPSEHTINGRRCDLELHMVHVRPNPEGRDKIAVVGLLYKIGPPDPFLSKLEKHMRGMVDIKGEKSIGVINPLDIIKMGGNKYYRYMGSLTVPPCTQGVIWTINKKIKTVSREQVKLLREAVHDYAERNARPVQPLNRREIHLYSPRNKPHN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3175 274 ProSiteProfiles Alpha-carbonic anhydrases profile. 29 267 IPR001148 -
Sto13g3175 274 SMART Carb_anhydrase_2a 33 267 IPR001148 -
Sto13g3175 274 CDD alpha_CA_prokaryotic_like 40 265 IPR041891 -
Sto13g3175 274 Pfam Eukaryotic-type carbonic anhydrase 40 264 IPR001148 -
Sto13g3175 274 Gene3D Alpha carbonic anhydrase 27 272 IPR036398 -
Sto13g3175 274 SUPERFAMILY Carbonic anhydrase 30 263 IPR036398 -
Sto13g3175 274 PANTHER CARBONIC ANHYDRASE 6 270 IPR023561 GO:0004089|GO:0008270
Sto13g3175 274 PANTHER ALPHA CARBONIC ANHYDRASE 3 6 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3175 Sto-Chr13 35871536 35872861 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3175 K01674 - gmx:100797935 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g0949 8 5984351 5985766 Sto13g3175 13 35871536 35872861 CCT
Sto13g3175 13 35871536 35872861 Sto13g3175 13 35871536 35872861 ECH