Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3120 ATGGGGGGTGAAGCAGTGAAGGGGTCATGGCTTAGTGGTTTGTTTCCAATCTCCCGCAAGTCAGATAATGACAAGGTAGTAATTGGAATTTTGGCGTCAGAAGTTTCTAGCTTGATGTTAAAGATAGTTCATTTATGGCATTCTTTGAGTGACAATGAGGTGACTAGGTTGAGGGAAGAGATAGTAAACTCACTCGGACTCAAAATACTTGtgtctgatgatgatgatttctTGATGGAACTTGCGCTGAATGAGTTACTCAGTAACTTGCAATGCTTAGCCAGGTCTGTGGCCAGCTTGAGTAAGAGGTGTGAGGATCCAGTCTATCATAGTTATGAACAATTTGTGAACAACCCAGTCCAGAATCGTTTTCAATGGTTTGGATGGGAATATAGATGGAAAAAGATGGAAAGGAAggtgaagaaaatggaaagatttGCTGCTGTCATGACACACTTGTCTCAAGAGATTGAAGTACTGCAAGAGTGTGAACAAACTTACAGGAGGATGCGGGCGAACCCGCGGATCAATCGGGTGAAATTGCTCCAGTTTCGGAAGAGGGTTGTGTTGCATCGCCAAGAAGTGACAACTCTGAGAGACATGTCTCCTTGGAATAGAAGTTATGATTATATTGTGAGATTGTTGGCAAGATCTCTATTTACAATACTGGAGAGGATCATACTTGTATTTGgaaattatcatcatcaaaatGGCAATGAGAGGTCCTACTCTCCTTTTATGTATTCTTATGTTCATAACTCACATGAAATCTATTCAAActcaaggaagaagaaagagcaACAAGCTTTCCAGTCACATATTGGTCACTTCAGAGGATGCATGTCTGTAGGAACTGATTCTCCTGTCATACAAACTGGTGGTTCTATGAGATTCAACAGTAATAATGTGAGGGCAGACAAAATATCTGTCTTTAGCAGGAAGAGAATATATTCTAAACTATCCATTAAAGGTGAACTAATAATAAAACCAGGTCCATCTACTCTTGGTGATGCGGCTCTAGCTCTCCACTATGCCAATGTGATCCTGCTGATCGAGAAGATGGCGTCATCGATCCACCTGATTGATCAAGAAACCAGGGATGTTCTGTACAATTTGTTACCAACAACAATAAAAAGTGGTCTGAGGGATAAGTTCAAGGGGTGTGGGAAAAGAAAGGCTTCCTCCAGCTTGGCTAGTGATGCTAACATTGCAGCAGGATGGAATATGGTGGTGAGGCAGATTCTGCAATGGTTGGCTCCACTGGCTCATAACATGATAAGATGGCATTGTGAGAGGAATTTTGGGAGGGATCATACAAGTTCCAAGCCAAATGTTTTACTGGTACACACTCTGTACTTTGCAAACCAAGCAACAACTGAAGCTGCTATTGTTGAACTTCTTGTTGGTCTCAACTATAACACATTTTCCATACCTGAGGATGTAGCAAATAGCATTGTCAAAATTCCTACAAGTACAATAAATTCAAGTGGAGTCACATTTGCATGA 1506 0.3918 MGGEAVKGSWLSGLFPISRKSDNDKVVIGILASEVSSLMLKIVHLWHSLSDNEVTRLREEIVNSLGLKILVSDDDDFLMELALNELLSNLQCLARSVASLSKRCEDPVYHSYEQFVNNPVQNRFQWFGWEYRWKKMERKVKKMERFAAVMTHLSQEIEVLQECEQTYRRMRANPRINRVKLLQFRKRVVLHRQEVTTLRDMSPWNRSYDYIVRLLARSLFTILERIILVFGNYHHQNGNERSYSPFMYSYVHNSHEIYSNSRKKKEQQAFQSHIGHFRGCMSVGTDSPVIQTGGSMRFNSNNVRADKISVFSRKRIYSKLSIKGELIIKPGPSTLGDAALALHYANVILLIEKMASSIHLIDQETRDVLYNLLPTTIKSGLRDKFKGCGKRKASSSLASDANIAAGWNMVVRQILQWLAPLAHNMIRWHCERNFGRDHTSSKPNVLLVHTLYFANQATTEAAIVELLVGLNYNTFSIPEDVANSIVKIPTSTINSSGVTFA 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3120 501 PANTHER BNAC09G50660D PROTEIN 266 473 - -
Sto13g3120 501 PANTHER BNAC09G50660D PROTEIN 4 241 - -
Sto13g3120 501 Coils Coil 83 103 - -
Sto13g3120 501 Pfam Domain of unknown function (DUF3475) 30 85 IPR021864 GO:0045927
Sto13g3120 501 PANTHER PLANT/T32M21-140 PROTEIN 266 473 - -
Sto13g3120 501 PANTHER PLANT/T32M21-140 PROTEIN 4 241 - -
Sto13g3120 501 Pfam Protein of unknown function (DUF668) 334 427 IPR007700 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3120 Sto-Chr13 35565913 35567534 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3120 - - gmx:100809482 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1004 8 6308395 6310107 Sto13g3120 13 35565913 35567534 CCT
Sto13g3120 13 35565913 35567534 Sto13g3120 13 35565913 35567534 ECH