Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g3008 ATGTCGGTAAAGGAGTGTGATCACCACAAAGGGTGGCGCCGGAAAATCTTCCGAAGAATATTCTGGGGAATCGTGATATTCCTGTTCATAGTGCTACTGACGATTCTAATAATCTGGGCAATACTGAAGCCATCGAAGCCATCCTTCATCCTGCAAGACGTCACCGTTTACGCCTTCAATGCGAGCGTCCCCAACTTCTTGACCTCTAACTTCCAAGAGGTCGATGTTTGGTCCCCTTTTGTCTACGGTACTAACGTTCCTGTCGCTCCGTACAATTTCCTTGGACTCAGCCAGGATCAGTCCGCCGGCAACGTTTTGGTCACCATCAAGATTGATGGACGTGTCAGATGGAAAGTTGGGGCTTTCGTCTCTGGCCGTTACCATCTCTACGTCCGTTGCCCTGCTTATATTTCTTTTGGATCCCGCAGCACTGGAATTTCCGTCGGTGAAAACGCCGTTAAGTATCAAGTCCTACAGCGATGTACAGTTAGCGTTTGA 498 0.488 MSVKECDHHKGWRRKIFRRIFWGIVIFLFIVLLTILIIWAILKPSKPSFILQDVTVYAFNASVPNFLTSNFQEVDVWSPFVYGTNVPVAPYNFLGLSQDQSAGNVLVTIKIDGRVRWKVGAFVSGRYHLYVRCPAYISFGSRSTGISVGENAVKYQVLQRCTVSV 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g3008 165 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 7 72 - -
Sto13g3008 165 PANTHER LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN 72 165 - -
Sto13g3008 165 PANTHER OS05G0367900 PROTEIN 72 165 IPR044839 GO:0098542
Sto13g3008 165 PANTHER OS05G0367900 PROTEIN 7 72 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g3008 Sto-Chr13 34886198 34886827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g3008 - - gmx:100788592 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1121 8 7105435 7106064 Sto13g3008 13 34886198 34886827 CCT
Sto13g3008 13 34886198 34886827 Sto13g3008 13 34886198 34886827 ECH