Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2989 atggaaaagaaacaaaaaattgtgCAATATAGGGAGAGGCTGTACAACACCCTTTGCTCTCCTGATCTGACAAATGAGGAGATACTTAAAACCCTTGTCAAAAGTCAACTCCTTAATTCCTCAGAACATGAAACAAAAGAGTATAAGGAGAAAGTAGTAGAAAGCAGGACTGCTGAAGTATCTAAATTTCTTGATATGTTGAGGAGTGCTTCTGTAGATGATAGCAAGAGTTCTAATACTTCACATGGTGATTGGAAATTGAAACAAGATACCGAAGAGTTTCGTGTTATGTATCGTGAAGGACCAGAGGGAACTCCCTTTCATACATTGCTAGTAGAAGGCTATGTAGATGGGCCTCTAGATGTCTGTTTGTGTATCTCGTGGGAGACAACCCTTtacaagaaatgGTGGCCTCAGTCTACTGTTCCCACTTTCAAAATTGTACAATCAGATTGTTTGCAGAAGATTCAGATCGCGGAACAAATATCTCTAGTGAGGGTGAAGGTTTCATGGCCACTATCTACAAGGGAGGCTGTCATGCACTGCTATCTATTTGAGTACTTTCAGGATGACTTAATTGTTGGTCTTATAAATACGGTCCCTGAGTCAAAGAGCATTAATGGGTTCAAGAATGAGGAAATTCCTGAAGCTAAGGATGCAGTGAGAATTGATATGATGGGAGGCTTTGCTTTGCAAAAGGTGGATTCAGAAAGAAGTTACTTTAGGACAATAGCAAATATGGATATTAAGCTGGATTTTGTACCTCCATCCCTTATAAACTTCATCTCAAGGCAGCTCATCGGCAGTGGTTTCAGACTTTATCAGAAGACAGTGGCTTCTATGAAGAGGCATGATAAGGAATTTAAAGAATTTAGCAAGGCCTTGGGGGATGACCCATTGTATGCTAGAATTCGTGAAGCTCTATATGACACTGTTGAAGCAGAGAACACTATGGATGATGAACAAGAGCTTAAGCAAAGTGTAACCATTCTTGAGGCAAAAACTGTATCTCTGGAGGATACAATCAATCAATATGCTGACAAGTCCATGCCTACGAATGCGATAGGATCAGATAATACCAAACCGATTAGTGAGATTGAGGAATTAgatggtgaagaagaagaagaagaaactgtacacatggaggaggaggaggaggatgccATGGAAGTAAATGATATTCCAATGGAGCAAGTTAAAACAAGGAGTCTACTAAAGGACAAGAAAAGAAATGTAAATATCAGTTCAGAGGTAGAAGAGGCATTAGACACATTAGAGAAGGCCATTTCAATGGTTAGGAAATATAGACTTCGTTGTGATGCTGTTGATTCCTATTCCCCAAAACGTACTCAACCAAGCTCACAAGAGGCACCTGAGGCTGAGACTATTTCTGACATTCACAACTTAAGgaAGACAGGAACAAACGTTATTTCAAAGGAAGTAAACTATAACAAAGTAGTTCCAGCTTCACCAAAGAAGAATCTTTCAAGACCTATTGAGGCAAACCAGGTTGCTTTGTGTTCTTTGGAAAATGGGGCAGCAGATATTCCAAGTATTGTTAATGGAATCCAAGATATAGCTTCAGATAGATCAAAGACAAGAAGGAAGGGAAAGTATAAATACTGTTGTTTTCTGCCACAATTGAAAAGGAAAAGTTAA 1659 0.3701 MEKKQKIVQYRERLYNTLCSPDLTNEEILKTLVKSQLLNSSEHETKEYKEKVVESRTAEVSKFLDMLRSASVDDSKSSNTSHGDWKLKQDTEEFRVMYREGPEGTPFHTLLVEGYVDGPLDVCLCISWETTLYKKWWPQSTVPTFKIVQSDCLQKIQIAEQISLVRVKVSWPLSTREAVMHCYLFEYFQDDLIVGLINTVPESKSINGFKNEEIPEAKDAVRIDMMGGFALQKVDSERSYFRTIANMDIKLDFVPPSLINFISRQLIGSGFRLYQKTVASMKRHDKEFKEFSKALGDDPLYARIREALYDTVEAENTMDDEQELKQSVTILEAKTVSLEDTINQYADKSMPTNAIGSDNTKPISEIEELDGEEEEEETVHMEEEEEDAMEVNDIPMEQVKTRSLLKDKKRNVNISSEVEEALDTLEKAISMVRKYRLRCDAVDSYSPKRTQPSSQEAPEAETISDIHNLRKTGTNVISKEVNYNKVVPASPKKNLSRPIEANQVALCSLENGAADIPSIVNGIQDIASDRSKTRRKGKYKYCCFLPQLKRKS 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2989 552 Gene3D - 83 288 IPR023393 -
Sto13g2989 552 SUPERFAMILY Bet v1-like 77 277 - -
Sto13g2989 552 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 342 - -
Sto13g2989 552 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 363 439 - -
Sto13g2989 552 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 464 545 - -
Sto13g2989 552 Coils Coil 366 386 - -
Sto13g2989 552 PANTHER START-2 DOMAIN PROTEIN 363 439 - -
Sto13g2989 552 PANTHER START-2 DOMAIN PROTEIN 464 545 - -
Sto13g2989 552 PANTHER START-2 DOMAIN PROTEIN 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2989 Sto-Chr13 34713873 34716987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2989 - - gmx:100805715 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1158 8 7350139 7354304 Sto13g2989 13 34713873 34716987 CCT