Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2933 ATGGCTCGATTCGGCGAAGGCGACAAGCGCTGGATCGTGGAGGATAGGGCCGATGGCACCAACGTCCACAATTGGCACTGGGCTGAAACCAACTGTCTCGAATGGTCTAGGAACCTATTCTCCAATCTCCTCTCCAATCTCACCCTTCTTGATGGCGAGGGCAGCTTGTACATCAAGACCAAGACCGTCGATAAGCTCGATGGCGAAGCCTATGTCAATGTGCGAAAGGGTAAAATCATACCAGGATACGAGCTTAGTCTCACCCTGTCTTGGGAAGGAGAAGCCAAGGATTCCGAGGGTAAAACCTTGCTCAAGGTCGATGGGACTGTGGAAATTCCCTATATATCGGACGAGAATGCGGATGAGGACCCGGAGCTGAAGGTCACTGTCAATGACGAAGGACCCGTTGGCAAGAGGCTCAAGGAGGCCATGCTTTCCCGGGGTAAGCCTTTCATTTTGGAGAAAGTTAGGGAGTGGGTCAAGAGTATGGCGAAAGGTGGGCCTGTCAAAGACGAATTGGAGCCCAAGAAAGTGACTCCACAGGCACAGACTCAAGCTGCCTCGGATCCGGCGGCGGCCAAGAAGGAGGTTGCGgcggagaagaaggagaaggttaAGAGTAACAGCAAGAAAGGTTGTAAAACAATCACCTTGACCGAGAAGTTTAGTTGCAGGGCAAGGGATTTGTATGAGATATTGATGGATGAGAATAGATGGAAAGGTTTTACGCAGAGCAATGCCAAGATAAGCAAGAATGTTGGTGGAGAGTTTTTTATTTTCGACGGATCCGTGACGGGAACGAATGTGGAGTTACAGGAGGCTAAACTGATTGTGCAGAAATGGAAATTTGGGAGCTGGCCCGATGGGATGCACTCTACGGTAAGACTTGTTCTTGAGGAACCTGAACCAGGGATTACGGTCGTCAAGCTCACACAGACGGATGTGCCTGAAGAAGACAGATACGGAAATGCCACTGTGGTGGAGAACACAGAGAGAGGATGGCGGGATCTCATCTTCCAAAGGATTCGGGCAGTTTTTGGATTTGGACTTTGA 1053 0.4919 MARFGEGDKRWIVEDRADGTNVHNWHWAETNCLEWSRNLFSNLLSNLTLLDGEGSLYIKTKTVDKLDGEAYVNVRKGKIIPGYELSLTLSWEGEAKDSEGKTLLKVDGTVEIPYISDENADEDPELKVTVNDEGPVGKRLKEAMLSRGKPFILEKVREWVKSMAKGGPVKDELEPKKVTPQAQTQAASDPAAAKKEVAAEKKEKVKSNSKKGCKTITLTEKFSCRARDLYEILMDENRWKGFTQSNAKISKNVGGEFFIFDGSVTGTNVELQEAKLIVQKWKFGSWPDGMHSTVRLVLEEPEPGITVVKLTQTDVPEEDRYGNATVVENTERGWRDLIFQRIRAVFGFGL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2933 350 Pfam Activator of Hsp90 ATPase homolog 1-like protein 226 346 IPR013538 -
Sto13g2933 350 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Sto13g2933 350 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 350 - -
Sto13g2933 350 Gene3D - 18 173 IPR036338 -
Sto13g2933 350 SUPERFAMILY Bet v1-like 215 349 - -
Sto13g2933 350 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Sto13g2933 350 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 350 IPR039981 GO:0001671|GO:0051879
Sto13g2933 350 MobiDBLite consensus disorder prediction 165 192 - -
Sto13g2933 350 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Sto13g2933 350 CDD SRPBCC_Aha1 215 348 - -
Sto13g2933 350 Gene3D - 212 349 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2933 Sto-Chr13 34384975 34386216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2933 - - jre:109011939 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1219 8 7704027 7705213 Sto13g2933 13 34384975 34386216 CCT
Sto13g2933 13 34384975 34386216 Sto13g2933 13 34384975 34386216 ECH