Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2887 ATGGGTTGGATTTTGCTTTTCTGGCTTTTAGTTTGTTTCCCCCTTAACATTGCCCTTCTCGCATCAACCTTCTACCAGgtTTTGGTCTTAACGGATTTGGAAGCTGATTATGTCAACCCATATGAAGCTTCATCTCGGATTAATTACTTCATTGTTCCTGAGTTTATTGGGCAGGGAGTACTATGCGCTCTCTTCCTTTTTACAGGGCACTGGTTCATGTTTTTGTTGACAGTACCTCTTACTTGCTACCATGTGATGCTGTAA 264 0.4129 MGWILLFWLLVCFPLNIALLASTFYQVLVLTDLEADYVNPYEASSRINYFIVPEFIGQGVLCALFLFTGHWFMFLLTVPLTCYHVML 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2887 87 Pfam Cornichon protein 7 86 IPR003377 GO:0016192
Sto13g2887 87 PANTHER CORNICHON-RELATED 3 87 - -
Sto13g2887 87 PANTHER PROTEIN CORNICHON 3 87 - -
Sto13g2887 87 SMART Cornichon_2 6 87 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2887 Sto-Chr13 34072456 34072865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2887 K20368 - gmx:100500341 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1270 8 7977390 7979155 Sto13g2887 13 34072456 34072865 CCT
Sto13g2887 13 34072456 34072865 Sto13g2887 13 34072456 34072865 ECH