Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2859 ATGACGGTGACGCCTAAGATATGCGTTAACGATGGGAAGTTGATGGTGCATGGGAAGACCATACTGAGTGAAGTGCCACAAAACATCGTGCTCTCTCCTGCACCTGCAAGTGGTGCATTTGTTGGTGCCACATCTTCCCACACCAAAAGCCTCCATGTCTTTCCTATGGGCCTCCTTCAGGGACACAGGTTCATGTGTTGCTTCCGGTTCAAGTTATGGTGGATGACTCAGAGAATGGGAAGCTGTGGAAAAGATGTGCCTCTGGAGACTCAGTTTATGCTCATAGAAAccaaagatgatgatgatgatgaccacCATTCTTCAACCTTGTACACTGTGTTGCTTCCTCTGCTGGAAGGCCAGTTTCGTGCTGTTCTACAAGGCAATCACAACAACCACTTGGAGATTTGCCTCGAGAGTGGAGATAATACAATTGAGACCAATCAGGGGCATCACTTGGTGTACATGCATGCTGGGACTAACCCCTTTCAACTCATCCACCAATCCGTCAAGGCTGTGGAAAAACACTTGCAAACTTTCCTTCATcgtgaaaagaaaagacTGCCGTCTTTTCTGGACTGGTTTGGGTGGTGCACTTGGGATGCCTTCTATACTGATGTCACAGCTCAAGGTGTTGAGGAAGGTCTCAAAAGCCTATCAGAGGGAGGTACACCTCCACGTTTCCTCATCATAGATGATGGTTGGCAACAGATTGAAAATAAATCAAAGGATGCTGATTCTGTCGTACAAGAAGGAGCACAGTTCGCTAGCAGATTGACTGGCCTAAAAGAGAACACTAAATTTCAGAAGACTGGACAGAACAATAACGAACAAACCTCTGGCCTCAAGCTCATGGTCCATCAATCAAAGCATCGCTACAATGTGAAatatgtgtatatatggcATGCTCTAGCTGGATATTGGGGAGGAGTGAAGCCATCAGCAAGTGGAATGGAACACTACGAGACAACATTGGCATACCCAGTACAATCTCCAGGTGTACTAGGAAACCAACCAGATTTAGTAATGGATAGCTTGTCCGTACATGGGTTAGGCCTAGTACACCCAAAGAAGGTTTTCGATTTCTACAACGAATTGCATGCGTACTTAGCCTCGTGTGGAGTAGATGGAGTGAAAGTGGATGTACAGAACATTATAGAGACCCTTGGTTCTGGACATGGAGGCAGAGTGTCCCTCACGCGCTGCTACCATCAAGCTCTGGAGGCCTCCATTGGTCGCAACTTCCCTGACAATGGGTGCATCGCTTGTATGTGTCATAATACTGATGGGATTTATAGTGCGAAGCAAACTGCTGTCGTGAGAGCCTCTGACGACTTCTATCCTCATGACCCTGCTTCTCACACTATCCATATTTCCTCTGTTGCCTATAACTCGCTTTTCCTTGGGGAAATCATGCAGCCTGACTGGGATATGTTCCATAGTTTACACCCAGCAGCAGAGTATCATGCTGCAGCTCGTGCAATTGGTGGATGTGCAATTTATGTTAGTGACAAGCCAGGACAGCACAATTTTGAGCTTCTTAAGAAGCTGGTTCTGCCTGATGGATCCGTTCTACGAGCTCAATTACCGGGGAGGCCTACCCGTGATTGTCTCTTTGTAGATCCTGCAAGAGATGGAACTAGCTTGCTGAAGATATGGAACATGAACAAATGCAATGGAGTGGTAGGTGTATTCAACTGCCAAGGTGCAGGGTGGTGCAAGATAGAGAAGAAGACTCGCATCCATGATGCATCTCCTTGCACTCTCTCTGCCTCCGTTTCTGCTTCTGATCTTGACCATTGGGAAGCCCACTCTATTGTTTATGCCTACACATCCGGGGACGTCATTAGGGTCCCAAAAGGTGCTTCTCTACCAGTAACTCTCAAAGTCATGGAATATGAACTTTTCCATTTCTGCCCAATCAAAGAAATAGCAGGGAGTGTGTCATTTGCAGCAATAGGGCTAATGGACATGTTTAATAGTGGAGGAGCAGTGGAGGAGGTTGAGATCCACAAAGCAAGTTCAAGTATTGTGGTGAGAGTGaagggaagtgggagatttggAGTGTACTGCTCTCACAAGCCACTCAAGTGTATGGTGGGTGGTACTCAAACGGATTTCAATTATGAGACCCAAACTGGGTTGATGACTTTTATCATTCCAGTTGCTGCACAAGACGTGTATAGATGCCTTGTACACATTCAAGTCTGA 2211 0.4487 MTVTPKICVNDGKLMVHGKTILSEVPQNIVLSPAPASGAFVGATSSHTKSLHVFPMGLLQGHRFMCCFRFKLWWMTQRMGSCGKDVPLETQFMLIETKDDDDDDHHSSTLYTVLLPLLEGQFRAVLQGNHNNHLEICLESGDNTIETNQGHHLVYMHAGTNPFQLIHQSVKAVEKHLQTFLHREKKRLPSFLDWFGWCTWDAFYTDVTAQGVEEGLKSLSEGGTPPRFLIIDDGWQQIENKSKDADSVVQEGAQFASRLTGLKENTKFQKTGQNNNEQTSGLKLMVHQSKHRYNVKYVYIWHALAGYWGGVKPSASGMEHYETTLAYPVQSPGVLGNQPDLVMDSLSVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGSGHGGRVSLTRCYHQALEASIGRNFPDNGCIACMCHNTDGIYSAKQTAVVRASDDFYPHDPASHTIHISSVAYNSLFLGEIMQPDWDMFHSLHPAAEYHAAARAIGGCAIYVSDKPGQHNFELLKKLVLPDGSVLRAQLPGRPTRDCLFVDPARDGTSLLKIWNMNKCNGVVGVFNCQGAGWCKIEKKTRIHDASPCTLSASVSASDLDHWEAHSIVYAYTSGDVIRVPKGASLPVTLKVMEYELFHFCPIKEIAGSVSFAAIGLMDMFNSGGAVEEVEIHKASSSIVVRVKGSGRFGVYCSHKPLKCMVGGTQTDFNYETQTGLMTFIIPVAAQDVYRCLVHIQV 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2859 736 Pfam Raffinose synthase or seed imbibition protein Sip1 9 719 IPR008811 -
Sto13g2859 736 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 736 - -
Sto13g2859 736 Gene3D Aldolase class I 193 514 IPR013785 -
Sto13g2859 736 PANTHER - 1 736 IPR008811 -
Sto13g2859 736 SUPERFAMILY (Trans)glycosidases 191 522 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2859 Sto-Chr13 33895981 33899235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2859 1 553 Glycoside Hydrolase AT3G57520 77.061 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2859 K06617 - gmx:100807861 1236.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1301 8 8228908 8230483 Sto13g2859 13 33895981 33899235 CCT
Sto13g2859 13 33895981 33899235 Sto13g2859 13 33895981 33899235 ECH