Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2573 ATGGGCAAAAAGCGTGTGATGGTGCCAGTGGGACAGGTTGACTTATCCACAGTCAAATATGAACATGAACTTATCCAAGCTCCACACTTGACTGGATTCGTGTTTAGATTATTTGTTCGAATTGTTGAAGCCCCATTAATAGGGCCTTTTGTAATATCTTTAATGAAGAAGCAAAATAAGATTGATGAGTTGTTGCGGAATACTGTGATACCAGAAGAGCCCATGTTCAAACCTGAATATCCACCTCAAGAAATGGAACCCAGTGTTATAATCCTTGAGGAAGATGGCAGGCCTGAGGACCGAGTTGAGTCTGCCTTGAATTGTCTTCCACATTATGATCCTGCTTCATACTGGGGAAATTCGTCTACACCTTTTCGTTACTGGAAAATACGTGATTATGCTGCTGCTTATCGATCAGGAAAAGTAACGCCATCTACGGTTGCAGAACACATCATTTCAGTTATAGAGGAGATTAGTAATAAGAAACCCTGGGATCCTTTACTGGTATCTTTTGATGCCGAAGAAATTAGGAAGCAGGCAGCAGCATCTACTCAGAGATTTGAAGCTGGAAATCCAATATCTATTTTGGATGGAATTTTTATGGCCATTAAGGATGACATTGACTGCTATCCCCATCCATCTAAGGGTGCTACTACATGGATGCATGAGGTACGCACTGTTAAAAAGGATGCTGTTTCTGTTTCAAGGCTGCGAAGCTGTGGTGTCATATTCATAGGGAAGGCAAATATGCATGAATTGGGCATGGGAACAACAGGGAATAATCCTAATTATGGAACAACAAGAAATCCTCATGCACCTGAAAGGTATACCGGAGGATCTTCTTCAGGTCCAGCTGCAATTGTAGCTTCAGGACTATGCTCTGCTGCACTGGGAACTGATGGCGGAGGTTCAGTTCGCATTCCTTCTTCCCTTTGCGGTGTAGTGGGATTAAAGACGACATATGGACGGACAGACATGGAGGGGTCGTTATGTGATTCTGGGACTGTGGAGATTATTGGACCCATCGCTTCAACAGTGGAGGATGTCATGCTAGTGTATGCAGCAATGTTGGGTTCATCACCTGAGAACAGAATCAGCATGAGACCGTCACCACCTTGTTTGCCTAACCTGTCCTCCTATGATGCTTCAAATGCTTTGGGATCATTACGATTAGGAAAGTACACTCCGTGGTTTAATGATGTACATTCAACAGAAGTATCAGATAAATGTGAGGATGCTCTTAATCTTCTGTCAAAATACCATGGTTGTGAAATGATAGAGATTGTTATACCAGAGCTTCATGAGATGCGAACTGCCCATCTTGTTTCCATTGGCTCTGAGTGCTTAAGCTCACTAAATCCTGATTGTGAGGACGGGAAAGGTAAAAGATTGACATATGATACTCGTGTAAGTATGGCACTTTTTCGATCATTTACTGCAGGAGATTATGTTGCAGCTCAATGTCTCAGGCGAAGGCTCATGTATTACCATATGGAGATTTTCAAGAAAGTGGACGTTATAGTGACTCCAACAACTGGTATGACGGCGCCCAAAATACCTCCTAGTGCTCTTAAAAGTGGCGAGACAGATATGCAGGTTACAGGTTACCTTATGCGGTTTGTCATTAATGCAAATCTTCTTGGATTCCCTGCCATTTCTGTTCCGGTTGGTTACGATAAGGAAGGACTTCCAATAGGTTTGCAACTAATAGGTCGACCATGGGGAGAGGCTACAATTCTGCGTCTAGCTTCCGTAGTGGAGAAACTCTGCGGTGAGTCGAAGAAAAAACCTGGGTCATACTATGATGTTCTGAGAGCAAACTGA 1824 0.4309 MGKKRVMVPVGQVDLSTVKYEHELIQAPHLTGFVFRLFVRIVEAPLIGPFVISLMKKQNKIDELLRNTVIPEEPMFKPEYPPQEMEPSVIILEEDGRPEDRVESALNCLPHYDPASYWGNSSTPFRYWKIRDYAAAYRSGKVTPSTVAEHIISVIEEISNKKPWDPLLVSFDAEEIRKQAAASTQRFEAGNPISILDGIFMAIKDDIDCYPHPSKGATTWMHEVRTVKKDAVSVSRLRSCGVIFIGKANMHELGMGTTGNNPNYGTTRNPHAPERYTGGSSSGPAAIVASGLCSAALGTDGGGSVRIPSSLCGVVGLKTTYGRTDMEGSLCDSGTVEIIGPIASTVEDVMLVYAAMLGSSPENRISMRPSPPCLPNLSSYDASNALGSLRLGKYTPWFNDVHSTEVSDKCEDALNLLSKYHGCEMIEIVIPELHEMRTAHLVSIGSECLSSLNPDCEDGKGKRLTYDTRVSMALFRSFTAGDYVAAQCLRRRLMYYHMEIFKKVDVIVTPTTGMTAPKIPPSALKSGETDMQVTGYLMRFVINANLLGFPAISVPVGYDKEGLPIGLQLIGRPWGEATILRLASVVEKLCGESKKKPGSYYDVLRAN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2573 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Sto13g2573 607 PANTHER GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT A-RELATED 4 605 - -
Sto13g2573 607 Pfam Amidase 168 580 IPR023631 -
Sto13g2573 607 SUPERFAMILY Amidase signature (AS) enzymes 125 592 IPR036928 -
Sto13g2573 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
Sto13g2573 607 PANTHER TRANSAMIDASE 4 605 IPR000120 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2573 Sto-Chr13 31851179 31858630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2573 1 607 Acyl Lipid Metabolism Gene Families AT5G64440 67.928 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2573 - - gmx:100778732 1040.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2573 13 31851179 31858630 Sto13g2573 13 31851179 31858630 ECH