Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2569 ATGAACTACAGTTCGAGGCCTGCTGGCAATGATGTTATTGGTATTGATTTGGGCACTACTAATTCATGTGTAGCAGTTATGGAGGGAAAGGCAAGGCATACTATTATTGAGAATTCAGaaggagctcgaacaacaccaTCTGTGGTTGCCTTCAACCAGAAAGGAGAGCTTCTTGTTGGTACGCCAGCCAAACGTCAAGCTGTTACCAACCCTACAAACACTCTTTTTGGTACCAAGCGCTTGATTGGTAGGCGGTTTGACGATGCTCAAACTCAGAAGGAGATGAAGATGGTTCCATACAAGATTGTTAAGGCTCCTAACGGAGATGCATGGGTTGAAGCTAATGGACAACAGTATTCACCTAGTCAAATTGGTGCCTTTGTTCTCACCAAAATGAAGGAAACGGCAGAAGCATATCTTGGGAAGTCAATTTCAAAAGCTGTAATTACAGTACCAGCTTACTTTAATGATGCTCAGAGGCAGGCAACAAAGGATGCTGGTAGAATTGCAGGTCTTGATGTGCAGAGGATTATCAATGAACCCACGGCTGCTGCACTTTCATATGGGATGAACAACAAGGAGGGTCTTATTGCAGTATTTGATCTTGGCGGTGGAACGTTTGATGTGTCCATTTTAGAAATTTCTAATGGTGTTTTTGAGGTCAAAGCAACAAATGGAGACACTTTCTTGGGTGGAGAGGATTTTGACAATGCATTGTTGGACTATCTTGTCAGTGAATTCAAGAGATCTGAGGGTATTGATCTTTCAAAGGATAGACTTGCCTTGCAGAGGCTTCGTGAAGCTGCTGAAAAGGCCAAGATAGAACTATCTTCAACATCTCAAACAGAAATCAACCTTCCTTTCATCACTGCTGATACATCTGGTGCAAAACATCTAAATATCACATTGACTAGATCTAAGTTTGAGAGTTTGGTAAATCACTTGATTGAGAGGACAAGGTCACCTTGTAAAAGCTGCTTGAAGGATGCTAACATATCTATCAAGGATGTTGACGAGGTTCTTTTAGTAGGAGGAATGACCCGTGTTCCTAAAGTACAAGAGGTTGTTTCAGAGATATTTGGAAAATCTCCTAGCAAAGGAGTAAATCCTGATGAGGCAGTCGCAATGGGAGCAGCCATTCAGGGTGGTATCCTTCGTGGAGATGTAAAAGAATTACTTCTCCTAGATGTGACTCCACTCTCTCTGGGTATTGAGACTCTGGGTGGTATCTTCACCAGGCTAATCAACCGTAACACTACAATTCCTACCAAAAAGAGTCAGGTATTTTCAACTGCAGCTGACAATCAAACACAGGTAGGTATCAAGGTGCTGCAAGGTGAACGTGAGATGGCATCTGACAACAAAATGCTAGGAGAATTTGATCTTGTTGGCATTCCACCTGCCCCGAGAGGTATGCCTCAGATTGAGGTCACATTTGACATTGATGCAAATGGAATTGTCACCGTCTCTGCTAAAGACAAGGCCACCGGTAAAGAACAGCAAATCACAATCCGCTCATCTGGAGGACTCTCAGATGATGAGATTGAGAAAATGGTCAGAGAGGCTGAGCTGCATGCCCAGAGAGATCAAGAACGAAAGGCTTTGATTGATATCAGAAACAGTGCAGATACAACCATTTACAGCATTGAGAAGAGCTTGAATGAGTACAGAGAAAAGATTCCTAGTGAAATTGCCAAAGAGATAGAGGATGCAGTTGCAGATTTGAGGAAAGCCATGTCAGGGGATAGTGCTGATGAAATTAAGTCCAAGCTTGACGCTGCCAACAAAGCTGTTTCTAAGATTGGCCAACACATGTCAGGTGGTTCCGGTGGTGGTTCTTCTGCTGGTGGTTCTCAGGGAGGGGACCAGGCTCCTGAGGCAGAATATGAGGAGGTGAAGAAGTGA 1905 0.4304 MNYSSRPAGNDVIGIDLGTTNSCVAVMEGKARHTIIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLFGTKRLIGRRFDDAQTQKEMKMVPYKIVKAPNGDAWVEANGQQYSPSQIGAFVLTKMKETAEAYLGKSISKAVITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNNKEGLIAVFDLGGGTFDVSILEISNGVFEVKATNGDTFLGGEDFDNALLDYLVSEFKRSEGIDLSKDRLALQRLREAAEKAKIELSSTSQTEINLPFITADTSGAKHLNITLTRSKFESLVNHLIERTRSPCKSCLKDANISIKDVDEVLLVGGMTRVPKVQEVVSEIFGKSPSKGVNPDEAVAMGAAIQGGILRGDVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGEREMASDNKMLGEFDLVGIPPAPRGMPQIEVTFDIDANGIVTVSAKDKATGKEQQITIRSSGGLSDDEIEKMVREAELHAQRDQERKALIDIRNSADTTIYSIEKSLNEYREKIPSEIAKEIEDAVADLRKAMSGDSADEIKSKLDAANKAVSKIGQHMSGGSGGGSSAGGSQGGDQAPEAEYEEVKK 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2569 634 Gene3D Actin; Chain A, domain 4 232 319 - -
Sto13g2569 634 PANTHER HEAT SHOCK PROTEIN 70KDA 5 618 IPR013126 GO:0005524|GO:0140662
Sto13g2569 634 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 387 543 IPR029047 -
Sto13g2569 634 Pfam Hsp70 protein 12 605 IPR013126 GO:0005524|GO:0140662
Sto13g2569 634 SUPERFAMILY Actin-like ATPase domain 194 385 IPR043129 -
Sto13g2569 634 Gene3D - 13 382 - -
Sto13g2569 634 ProSitePatterns Heat shock hsp70 proteins family signature 2. 199 212 IPR018181 -
Sto13g2569 634 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Sto13g2569 634 TIGRFAM prok_dnaK: chaperone protein DnaK 12 605 IPR012725 GO:0005524|GO:0006457|GO:0051082
Sto13g2569 634 ProSitePatterns Heat shock hsp70 proteins family signature 1. 15 22 IPR018181 -
Sto13g2569 634 PANTHER HEAT SHOCK 70 KDA PROTEIN, MITOCHONDRIAL 5 618 - -
Sto13g2569 634 PRINTS 70kDa heat shock protein signature 11 24 - -
Sto13g2569 634 PRINTS 70kDa heat shock protein signature 40 52 - -
Sto13g2569 634 PRINTS 70kDa heat shock protein signature 63 71 - -
Sto13g2569 634 PRINTS 70kDa heat shock protein signature 147 167 - -
Sto13g2569 634 PRINTS 70kDa heat shock protein signature 205 215 - -
Sto13g2569 634 PRINTS 70kDa heat shock protein signature 337 353 - -
Sto13g2569 634 PRINTS 70kDa heat shock protein signature 368 388 - -
Sto13g2569 634 PRINTS 70kDa heat shock protein signature 391 410 - -
Sto13g2569 634 PRINTS 70kDa heat shock protein signature 472 488 - -
Sto13g2569 634 SUPERFAMILY Actin-like ATPase domain 12 193 IPR043129 -
Sto13g2569 634 Coils Coil 255 282 - -
Sto13g2569 634 MobiDBLite consensus disorder prediction 598 634 - -
Sto13g2569 634 MobiDBLite consensus disorder prediction 606 620 - -
Sto13g2569 634 Hamap Chaperone protein DnaK [dnaK]. 9 632 IPR012725 GO:0005524|GO:0006457|GO:0051082
Sto13g2569 634 Gene3D - 189 369 - -
Sto13g2569 634 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 509 IPR029047 -
Sto13g2569 634 CDD HSPA9-like_NBD 9 385 - -
Sto13g2569 634 Gene3D - 510 607 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2569 Sto-Chr13 31820241 31822580 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2569 12 617 Miscellaneous Gene Families AT5G42020 51.433 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2569 K04043 - gmx:100804559 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2569 13 31820241 31822580 Sto13g2569 13 31820241 31822580 CCT
Sto13g2569 13 31820241 31822580 Sto13g2569 13 31820241 31822580 ECH