Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2514 ATGGGTTCAAGATCAATTTCCGACGAGACGAAGCCGCATGCGGTGCTAGTCCCCTACCCAGCACAGGGTCATATCAATCCAATGACCCACCTGGCCAAGCTCCTTCACTCCAAAGGCTTCCACATCACCTACGTCAACACTGAGTTCAACCACAAGCGCCTCCTCCGATCCAGGGGTACTCACGCCCTCCACGCCCTTCCTCACTTTCGCTTCGAGACCATCCCCGACGGCCTACCTCCCTCCGACCTTGATGCCGGCCAAGACCCCACCTCTATCTCCTATTCCACTAGCAACAACTGCGTGGCTCCATTGGTTGAGCTCATGAGTAAGCTCAAACAATCTGCTTCTGCTCCTCCCATTACCTGTGTTGTTCACGATGGAATCGCCTCCTTTGCTGCCAAGGCTGCTAACATTCTCGGGATTCCAAGTGTCCTCTTCTGGACCGCCAGTTCTTGTGGCCTTGTGGGCTATTGCCAGTATCCCTATCTTCTACACAACGCCACCTTTCCACTCAAAGATGAAAGCGATGTGACAAACGGGTACTTGGAAACCAAACTGGAGTGCATCCCGGGAATCCACAACTTTCGATTGAGGGACCTCCCTAGCTTCATAAGAACCACAGATCCACAACACATAATGCTCAACTTTGTGGTGGGAGAGATAGAAGCAGCCCATAGAGCCTCCATCATAGTCATCAACACCTTCCATGACTTTGAGAAATCCTCATTGGACTACCTCTCCTCCCTCCTCCCTGCCCACATCTACACCATCGGCCCTCTCCACCTCCTTCTCCGCCAAATCAACAACACTACTACTCTCTCATCCATAGCCTCCAATCTCTGGAAAGAGGACTCCTCCGTCCTCCACTGGCTCAACTCCCAATCTCCCGCCTCCGTCTTGTACGTCAACTACGGCAGCGTCACTACTATGTCCTCTGCCCAATTGGCCGAGTTCGCATGGGGGTTGGCCACCACCAAACGCCCCTTCCTGTGGGTCATACGACCGGACCTAGTCGAGGGTGGTGCCTCAATGTCAACGGTGCTATCATCGGATTCAGAGTTCAAGAAGCAGATAGAAGGGAGGGGAATGATAACAACCTGGTGTCCGCAGGAGGAGGTGTTGAACCACCCTGCGGTAGGAGGCTTCTTGACGCACTGCGGCTGGAACTCTACGTTGGAGAGCGTGTGCGCCGGCAAGCCCATGCTGTGCTGGCCGTTTTTTGCGGAGCAACCAACCAATTGCCGCTATGCTTGCGTGGAGTGGGGGATAGGGATGGAGGTGGCACCCGTGGTGGAGAGGGAGGAGGTCAGGAGGTTGGTGCTGGAGCTTATGGAGGGAGAGAATAGAGGGAAGGAGATGAGGGAGAAGGTTCTGGAATGGAAGAACAAGGCGGAGGAGGCCACTAACCCCACCGGTTCTTCTTATCAGAATATGGAGAGGATGATTGAGGCCATGCTCAACATCAAACCTCctgtttaa 1479 0.5389 MGSRSISDETKPHAVLVPYPAQGHINPMTHLAKLLHSKGFHITYVNTEFNHKRLLRSRGTHALHALPHFRFETIPDGLPPSDLDAGQDPTSISYSTSNNCVAPLVELMSKLKQSASAPPITCVVHDGIASFAAKAANILGIPSVLFWTASSCGLVGYCQYPYLLHNATFPLKDESDVTNGYLETKLECIPGIHNFRLRDLPSFIRTTDPQHIMLNFVVGEIEAAHRASIIVINTFHDFEKSSLDYLSSLLPAHIYTIGPLHLLLRQINNTTTLSSIASNLWKEDSSVLHWLNSQSPASVLYVNYGSVTTMSSAQLAEFAWGLATTKRPFLWVIRPDLVEGGASMSTVLSSDSEFKKQIEGRGMITTWCPQEEVLNHPAVGGFLTHCGWNSTLESVCAGKPMLCWPFFAEQPTNCRYACVEWGIGMEVAPVVEREEVRRLVLELMEGENRGKEMREKVLEWKNKAEEATNPTGSSYQNMERMIEAMLNIKPPV 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2514 492 PANTHER GLYCOSYLTRANSFERASE 11 486 - -
Sto13g2514 492 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 289 426 IPR002213 GO:0008194
Sto13g2514 492 Gene3D Glycogen Phosphorylase B; 282 466 - -
Sto13g2514 492 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 11 482 - -
Sto13g2514 492 ProSitePatterns UDP-glycosyltransferases signature. 367 410 IPR035595 -
Sto13g2514 492 PANTHER GLYCOSYLTRANSFERASE 11 486 - -
Sto13g2514 492 CDD GT1_Gtf-like 12 467 IPR002213 GO:0008194
Sto13g2514 492 Gene3D Glycogen Phosphorylase B; 13 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2514 Sto-Chr13 31350529 31352086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2514 1 491 Glycosyltransferase AT1G22380 52.535 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2514 - - tcc:18608265 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2514 13 31350529 31352086 Sto13g2514 13 31350529 31352086 ECH