Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2504 ATGGAGTCTGTAGCATCAAATTCAAAACCCCATGTTGTGATGACCCCTTTCCCAGTTCAAGGTGATCTAAACTCCTCTCTCAAGCTAGCCAAACTCCTTCATTCAAGAGGCTTCTTTGTAACTTTTGTGAACACTGACTTCAACCATACACGCTTGCTAAACTCAAGGGGTCCTCATGCCCTTCATGGCCTCTCTGATTTTCGTTTTGAGAGCATTCCAGATGGCCTTCCTCCTTCTGATATTAATGCCACTCAAGATATTGCTTCTCTGTGTGAAGCTACCAGAAACAACTGCCTCCTTCCCTTCAAGAAGCTTCTGGAGAGGCTGAATCAGAATGCCTCTAAATCTAATGGGGTTGTGCCACCTGTCACATGCTTGATTTCTGGTGCTCTCATGACTTTTACTATTGAAGCAGCTCAACAATTTGGCCTTCCTATTGCTCTCTATTGGCCTCCAAGTACTGTCTCCTTTTTGGGTATTTTCCACTACCGTACCCTTCTCCACAAGGCTGTTATTCCTTTAAAAGATCAGAGTTGTCTAACAAATGGGTATTTGGAGACAGAACTGGACTGGCTTCCAGGAATGAAAGGCATCAGAATCAAGGACCTTCCTAGCTTTGTGAGAACAACTGATCCAAATGATTTCATGCTCAACTTCCTCATGACTGAGATAGAAGCTTCTCAATCTTGTCCTATCATCTTCAATACATTCTATGAGCTAGACAGTGATGTACTCAACACCCTCTCTCCTCACTTCCCTTCTCTTTACACCATTGGCCCTCTCCCTTTGCTTCTCAACCATATCCCACACTCCCACTTGGACTCCATTGCTTCTAATCTCTGGAAAGAAGACACTGAATGCCTCCATTGGCTCCAATCCAAGCCACCCAAATCTGTGGTTTATGTCAATTTTGGAAGCATCACTGTTATGTCTCCTCAACAGCTCCATGAGTTTGCTTGGGGTTTGGCCAACAGTAAGAAACCTTTCTTGTGGATCATAAGGCCTGACCTTGTGAATGGTGGCTCTGTGATTCTGTCACCTGAGTTTCTCAATGAGACTAAAGATAGAGGCTTTATAACAAGCTGGTGTGACCAAGAGAAAGTGCTGAACCACCCTTCAATTGGAGGCTTCTTGACACATTGTGGATGGAACTCCATGACTGAGAGTTTGTGTGCAGGTGTTCCTATGGCTTGTTGGCCTTTCTTTGCAGATCAGCAAACGAATTGTAGATATGCATGCACAGAGTGGGGAATTGGGATTGAGATAGAGAATGATGTGAAGAGGGAAGAAGTGGAGAAACTTGTGATTGAGTTGATGGAAGGGGAGAAGGGGAAGAAGATGAGACAGAGTGCTTTAGAGTGGAAGAAAATTGCTGAGGAGGACACTAAACCTGGGGGTTCTTCTTACATGAACTTggacaaattaattaaggaagTGCTGCTAAAATCATAG 1452 0.436 MESVASNSKPHVVMTPFPVQGDLNSSLKLAKLLHSRGFFVTFVNTDFNHTRLLNSRGPHALHGLSDFRFESIPDGLPPSDINATQDIASLCEATRNNCLLPFKKLLERLNQNASKSNGVVPPVTCLISGALMTFTIEAAQQFGLPIALYWPPSTVSFLGIFHYRTLLHKAVIPLKDQSCLTNGYLETELDWLPGMKGIRIKDLPSFVRTTDPNDFMLNFLMTEIEASQSCPIIFNTFYELDSDVLNTLSPHFPSLYTIGPLPLLLNHIPHSHLDSIASNLWKEDTECLHWLQSKPPKSVVYVNFGSITVMSPQQLHEFAWGLANSKKPFLWIIRPDLVNGGSVILSPEFLNETKDRGFITSWCDQEKVLNHPSIGGFLTHCGWNSMTESLCAGVPMACWPFFADQQTNCRYACTEWGIGIEIENDVKREEVEKLVIELMEGEKGKKMRQSALEWKKIAEEDTKPGGSSYMNLDKLIKEVLLKS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2504 483 CDD GT1_Gtf-like 10 478 IPR002213 GO:0008194
Sto13g2504 483 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 252 452 IPR002213 GO:0008194
Sto13g2504 483 PANTHER GLYCOSYLTRANSFERASE 9 480 - -
Sto13g2504 483 Gene3D Glycogen Phosphorylase B; 11 466 - -
Sto13g2504 483 ProSitePatterns UDP-glycosyltransferases signature. 362 405 IPR035595 -
Sto13g2504 483 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 9 477 - -
Sto13g2504 483 PANTHER GLYCOSYLTRANSFERASE 9 480 - -
Sto13g2504 483 Gene3D Glycogen Phosphorylase B; 282 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2504 Sto-Chr13 31266369 31267990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto13g2504 4 481 Glycosyltransferase AT1G22400 54.244 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2504 - - gmx:100786063 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2504 13 31266369 31267990 Sto13g2504 13 31266369 31267990 ECH