Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g2501 atggaAGCTATGTATAAATGCAGAAAGTGCAGAAAGGGTGCCTTATTCAACACAAGTACTAATAAGCACTTCTGCTATGATTGCCAAAGAATAAAGAGCTCACACTCAAAAATTTGTGAAGCAAAAATCAGCTGCAGAGGGTGCAGGAGGGATTGCCCTGTGTGCCACACTATCAACCCTAGTTCAATTTCAGGACATGGCCAATCAAATTATAAAGATACTAGTGGGATGGGAATGAGGTTGATAAAAAGTGGTGTCAGAAATCTCAAACTTGATGATATGGCAGataatgcatataatttgctGAATAAACAAAGGTCTTCATCATTCTCCTCAATAGGTTCTTCCTTCTTGTCCAGAAGACACAACAAACGTGCGGTTCTATGCGGTGTTACTTACAGGAAAAGGAAGTTCAGGCTCAAGGGAACTGTTAATGATGTTATCAACATGAAGGAGCTTCTTGTTAAGGTTTTTGAATTCCCCAGGGAATGCATACGTGTGCTCACAGAACAAGAGAGGAGTCCTGACTCCATTCCCACAAAGAAGAACATTCTGGATTCCTTGAAGTGGCTCGTGGAAGGGTGCCAGCCGGGCGATTCGCTGGTGTTTTACTTCTCAGGACATGGCTTGCAGCATGCAGATTTCAAAGAAGATGAGGTTGATGGCATGGATGAAAGTATTTGTCCAGTTGATTTCGTGCAAGAAGGTGTCATTCTTGACAATGATATAAACTCCATCCTTGTGTGGCCTCTCAAGCAAGGTATCACACTTCATGCCATTGTTGATGCTTGTCACAGTGGAACAATTCTCGATCTGACATATGTCTATGACTCAGAAAAGTGA 843 0.4128 MEAMYKCRKCRKGALFNTSTNKHFCYDCQRIKSSHSKICEAKISCRGCRRDCPVCHTINPSSISGHGQSNYKDTSGMGMRLIKSGVRNLKLDDMADNAYNLLNKQRSSSFSSIGSSFLSRRHNKRAVLCGVTYRKRKFRLKGTVNDVINMKELLVKVFEFPRECIRVLTEQERSPDSIPTKKNILDSLKWLVEGCQPGDSLVFYFSGHGLQHADFKEDEVDGMDESICPVDFVQEGVILDNDINSILVWPLKQGITLHAIVDACHSGTILDLTYVYDSEK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g2501 280 Gene3D - 64 280 - -
Sto13g2501 280 PANTHER METACASPASE-4 24 279 - -
Sto13g2501 280 SUPERFAMILY Caspase-like 127 238 IPR029030 -
Sto13g2501 280 PANTHER ICE-LIKE PROTEASE (CASPASE) P20 DOMAIN PROTEIN 24 279 - -
Sto13g2501 280 Pfam Caspase domain 124 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g2501 Sto-Chr13 31250674 31251640 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g2501 K22684 - gmx:100796640 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto13g2501 13 31250674 31251640 Sto13g2501 13 31250674 31251640 CCT
Sto13g2501 13 31250674 31251640 Sto13g2501 13 31250674 31251640 ECH