Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto13g0454 ATGGGTACAGGCTTGAAAGCAAAGAACAACAGGAGAGGTGCTAGTGTTAAAATTGATTACCTCATTCATATTGAGGAAATTAAGCCTTGGCCCCCATCACAATCCCTCAGATCCCTTCGCTCTGTACTGATCCAATGGGAGAATGGTGAACGCAGTTCAGGTTCTACCAGTCATGTTGCCCCCTCACTGGGTTCTGTAATAGGCGAAGGCAAAATTGAATTTAATGAGTCATTTAGGCTTCCTGTGACTCTGTTGAGGGATATGTCTGTCAGGAGTGGCCGTGCCGATATATTCCAAAAGAATTGCTTGGAGTTCAACTTGTATGAGCCCCGAAGGGATAAGGTTGTTAAAGGTCAGTTGTTGGGGACTGCCATAGTAGACTTGGCAGAATATGGTGTGCCTAAGGAGGCCTTAGGCATTAGTGCTCCAATGAAGTGCACGAGGAATTACAAAAACACAGATCAACCACTTTTATTCATAAGAATTGAGCCTGTTGGAAAGAATCGGACTAGCTTCGCGACAAGGGACGCCTTGTCAAAAGAGGTGCCAAAGGACATTAATGGTGGTGAGTCAGCATTGAAGAATGAAGAATATGCTGATGAAGCTGAGATTGCCTCTTATTCTGACGATGATGTTTCCTCACATTCATCTGTGGCAGCTATGGCAGTGGCTTCTGCCCATGACACCAGTGGGTGTATGCCTGCCGAACTTCTAGAGAATGGACCAACTCAAAACACTGTTAGAAATGAGAAGGAGCATCCCCTCTCTTCAGAAACAAGGTTTGAAAAATCAAATATGGTACCACAAGATAAATGCCAGACACTGGAGCTTGAGAGTTCATTATGCACGTCATCACTGGATATATCATCTGATCTTGGGAGTCCGGTAAATGGTTATGCTTCTATTTCTAACTCACCTAATTGTAGTTCGTTGACAACTCAAAAGTCTGCTGTTTCCCCAATTGCTTATTCTTCTCAACCATCCTTAGTTGATGACAAATTAGAGGACGAAGATTTTAAGACCAATGCAAGATGCAGTGGTAATAAACATTCAGATGAGGCGGTTTATGAAAAGGTTAATCATTGGGATAATCCAGGCTCTCTAAATTGCGATGGTTCTGAAGTCAATAACAAATTCAATGGGAGAGCTGAGGAAGGTGATGAGTATTGTCTGAAGGAAGAAGGAGGTGGTGAACTTTACAGTTGCTTTGTCGAGGGAAAATGTGAAGAACAATCTTGCTTGGATAAGAAAAACAACATAGAAAATGAAAGATCAGAAGCACAAGGTGCCAAAGATCACATCTTATTGAGTAGCAGTACATATCCTTTAGGCATGTCTAATATGGATATGAAGGGCAATATCCTGAAAAATGAAAGATTAAAGCATGTGAAATCTGTGAGGTCAATTGGTGGTAATCATAATTTTGAAGTAAAGGAAATTGGTATTGTTGGAGATGCACAAAACAGTGGAGAAAACATCAGAGGCAGTGAAAAAAAAGATGCTAAGGTTTATCCAAAGGAAGCAAGAACGACTATTCTAGACAGCAGAGTTGAGCatttagaaaacaaaataaagacaCTTGAAGGAGAGTTGAGAGAAGCAGCAGCTATTGAAGCTGCTTTATATTCTGTAATTGCAGAGCATGGAAACTCCACGAGTAAGGTCCATGCCCCAGCTCGGCGCCTTTCTAGGCTGTATCTCCATGCTTGTAAAGAAAATCATCGAGCTAGAAGGGCTGGGGCAGCTAAAACTGCTGTTTCAGGGTTAGTACTTGTTGCAAAGGCATGTGGAAATGATGTTCCAAGGTTGACATTTTGGTTGTCTAATGCTATTGtgttgagaacaattatatgcCAAACCACCAAAGACATGGTGCCACCAGTTTCTGTAGGATCTAATGGAAACTTAACACCTTCATTACGATGGAAGGGATCCTCACctaggaaaaatgaatatgcagCAGCAGAATACAAATGTTTTGATAACTGGGATGACCCCTATGTATTCATGTCAGCACTGGAAAAGATAGAAGCTTGGATCTTCTCCCGCATTGTGGAATCTATCTGGTGGCAGACTCTTATTCCACATATGCAATCCTGTGATGCCATAATTGCTAAAATGGAAGTGGATCTTGCTTCATGCCCAAAAAGTTATAGAAGGATGTCTAGCTCATGCGATCAAGAACAGGGGAGCATTTCACTAGATCTTTGGAAGAATGCTTTTAGGGAAGCCTGGGATAGGCTCTGTCCCATTCGCGCTGGAGGGCATGAGTGTGGCTGTTTGCCTGTGCTGTCTAGATTGATAATGGAGCAGTGCGTGACAAGATTAGATGTGGCTATGTTTAATGCCATTCTTCGCCAATCTGCTGATGAAATCCCAACTGATCCTGTATCTGATCCCATTAGTGATCCCAAGGTTCTTCCCATCCCACCTGGGAAATCAAGCTTTGGAGCTGGTGCACTGCTAAAAACTGCGATTGGGAACTGGTCTAGATGGCTGACTGACTTATTTGGTATGGATGATGATGACTATGACTCATCTGAAGACACGGATGGCCTAGACAACAATGATGGGAGACAAAATACATCCTTCAAGTCGTTCCATCTTCTTAATGCACTAAGTGATCTCCTGATGCTTCCCAAGGATATGCTATTAAATTCATCCATCAGGAAAGAGGTATGCCCAATGTTTAGCACGCCACTTATCAAGAGGATTCTAGACAATTTTGTTGAAGATGAGTTTTGCCCTGATCCAATTCCTGCTGTTGTTTTTGAAGCTCTAAACTCAGAGGATGATCTTGACTACGTTGAGGAATGTGTAAGAAACTTCCCATGCAATGCATCTCCCGTTGTGTACTTAGCTCCTCCAGCAACTTCCATTGCAGCCATTCTTGGGGAGCTTGGAAGTGAATCTGAGCTGAGAAGAAGCAGATCTTCTGTTCTGAGGAAGGCATACACCAGTGATGATGAACTCGATGAATTAAATTCCCCATTGCCTTCAATTCTATCTGATGCTTCCTTATTCTCAGCAGTTTCAACAAAGCCAACATGGAAATCAAAAGAAATTTCCAATGGTTCTGCTGTCAGATATGAACTACTCAGGGACATATGGATGAGCTGCGAGtag 3126 0.4178 MGTGLKAKNNRRGASVKIDYLIHIEEIKPWPPSQSLRSLRSVLIQWENGERSSGSTSHVAPSLGSVIGEGKIEFNESFRLPVTLLRDMSVRSGRADIFQKNCLEFNLYEPRRDKVVKGQLLGTAIVDLAEYGVPKEALGISAPMKCTRNYKNTDQPLLFIRIEPVGKNRTSFATRDALSKEVPKDINGGESALKNEEYADEAEIASYSDDDVSSHSSVAAMAVASAHDTSGCMPAELLENGPTQNTVRNEKEHPLSSETRFEKSNMVPQDKCQTLELESSLCTSSLDISSDLGSPVNGYASISNSPNCSSLTTQKSAVSPIAYSSQPSLVDDKLEDEDFKTNARCSGNKHSDEAVYEKVNHWDNPGSLNCDGSEVNNKFNGRAEEGDEYCLKEEGGGELYSCFVEGKCEEQSCLDKKNNIENERSEAQGAKDHILLSSSTYPLGMSNMDMKGNILKNERLKHVKSVRSIGGNHNFEVKEIGIVGDAQNSGENIRGSEKKDAKVYPKEARTTILDSRVEHLENKIKTLEGELREAAAIEAALYSVIAEHGNSTSKVHAPARRLSRLYLHACKENHRARRAGAAKTAVSGLVLVAKACGNDVPRLTFWLSNAIVLRTIICQTTKDMVPPVSVGSNGNLTPSLRWKGSSPRKNEYAAAEYKCFDNWDDPYVFMSALEKIEAWIFSRIVESIWWQTLIPHMQSCDAIIAKMEVDLASCPKSYRRMSSSCDQEQGSISLDLWKNAFREAWDRLCPIRAGGHECGCLPVLSRLIMEQCVTRLDVAMFNAILRQSADEIPTDPVSDPISDPKVLPIPPGKSSFGAGALLKTAIGNWSRWLTDLFGMDDDDYDSSEDTDGLDNNDGRQNTSFKSFHLLNALSDLLMLPKDMLLNSSIRKEVCPMFSTPLIKRILDNFVEDEFCPDPIPAVVFEALNSEDDLDYVEECVRNFPCNASPVVYLAPPATSIAAILGELGSESELRRSRSSVLRKAYTSDDELDELNSPLPSILSDASLFSAVSTKPTWKSKEISNGSAVRYELLRDIWMSCE 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto13g0454 1041 Coils Coil 510 537 - -
Sto13g0454 1041 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 15 132 IPR019448 -
Sto13g0454 1041 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 1 1041 IPR021827 GO:0005643
Sto13g0454 1041 PANTHER EEIG1/EHBP1 PROTEIN AMINO-TERMINAL DOMAIN PROTEIN 1 1041 - -
Sto13g0454 1041 ProSiteProfiles C2 NT-type domain profile. 8 166 IPR019448 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto13g0454 Sto-Chr13 3949479 3957808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto13g0454 - - gmx:100783487 1186.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g1728 8 11010380 11015941 Sto13g0454 13 3949479 3957808 CCT
Sto13g0454 13 3949479 3957808 Sto13g0454 13 3949479 3957808 ECH