Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1538 ATGGATTTCTCGGCGTGCAGCAACCTAGCACTGAAATGGGCGGCGGATCACATTGTTCGCGATAGAGATACTCTCATTCTCGTCACCATCCTGCCTGAACAGAACTACGAGAGCGGCGAGATGCAGCTCTGGGAAACTACTGGATCTCctcTGATACCTATAGTTGAGTTCAGTGATGCTGCGACAATGAAAAAGTATGGAGTGAAAACTGATGCTGAAACCCTTGATATTGTGAAAAATGCGGGAAAGAATCAGCCAAAGGTAGAGATAATAATGAAGATATATTGGGGAGATGCTCGAGAGAAGTTATGTGAAGCAGTTGATCATATACCTTTGGATTGCCTCGTTGTAGGTAACAGAGGCCTTGGCACTATTAAAAGgACCTTAATGGGCAGTGTCAGCAATTATATAGTGAATCATGCCTCCTGTGCCGTTACTGTGGTGAAATCTAAAGGACAGcattaa 465 0.4344 MDFSACSNLALKWAADHIVRDRDTLILVTILPEQNYESGEMQLWETTGSPLIPIVEFSDAATMKKYGVKTDAETLDIVKNAGKNQPKVEIIMKIYWGDAREKLCEAVDHIPLDCLVVGNRGLGTIKRTLMGSVSNYIVNHASCAVTVVKSKGQH 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1538 154 Pfam Universal stress protein family 1 149 IPR006016 -
Sto12g1538 154 Gene3D HUPs 1 154 IPR014729 -
Sto12g1538 154 CDD USP_Like 1 148 - -
Sto12g1538 154 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 150 - -
Sto12g1538 154 PRINTS Universal stress protein signature 109 121 IPR006015 -
Sto12g1538 154 PRINTS Universal stress protein signature 127 149 IPR006015 -
Sto12g1538 154 PANTHER IMP2'P 1 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1538 Sto-Chr12 10684577 10690576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1538 - - csin:114316822 219.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1538 12 10684577 10690576 Sto12g1538 12 10684577 10690576 ECH