Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1535 ATGAACACcttccttctctcttcttcctcttcttcaccttcttcctcttccactTCCTCTCCTTCCAATTTCACCATCATCACTCactcccaaaaccctaaccatcTCTTCAAGTTCACCTTCAAATTACCCGTTTTGCCCCTCcactccaccaccaccaccaccaccacatcCCCTTCCTACCACCACTCCACCGTCACTCCATTATGTTCCTCCCTCAGGGACTCATCATCCGCCACCGTGCTCGAGAAGAAGCCGGTCTTTATACGACCGGCACCGGACGGCGTCGTTTCGAGCAAAGAGCGTCCCGACGGCAATGGCGCCGTTTCGGCGGAGGAGTCTAATCTGGACGCCGTGCTCGTCGTTCGCCGGCCGGTGAAGGAGGTCGGAGACGAAGGAGGGAGGGAGGAGGAGGACGATGGCGATGAGGCGAAGGAGTCGGCGATCGATGCGGGGCTCACGAAGATGGCGAAGAAGATGCCGATGTTCGAGCCGGAGAGAGTGGAATCGGAATCGAAAGAGAGGATGCTTGGTGTGAATTTGGATTTGGCGTTGTATCGTGCGAAGGTTTTGGCTAGGAATTTTCGGTATGAAGAAGCAGAGACAATGCTTCGAAAGTGCATACAAAATTGGCCTGAAGATGGTCGACCTTATGTGGCTCTGGGGAAAATATTGAGCAAGCAATCGAAAACAGGTCAAGCAAGAGAAGTATACGAAAAGGGCTGCCAAGCAACTCAGGGAGAAAATGCCTACATTTGGCAGTGTTGGGCTGTTCTTGAAAAGAAGATGGGAAATATCAGGAGAGCAAGAGAGTTATTTGATGCAGCCACAGTTGCTGATAAGAGGCATGTTGCTGCTTGGCATGGATGGGCAGTTCTAGAGCTAAAACAGGGAAATATAAAGAAGGCAAGGAATCTACTTGCCAAAGGTCTTAAACATTGCGGACGCAATGAGTACATATACCAAACACTTGCGCTGCTAGAAGCGAGAGCAAATCGGTATCAGCAGGCTCGATACTTATTCAAGCAGGCCACTAAATGTAATCCTAAAAGCTGTGCTAGTTGGCTTGCTTGGGCACAATTGGAGATGCAACAGGAAAACAACCGTGCTGCTAGGCAATTGTTTGAGAAAGCAGTAGATGCAAGTCCCAAGAATAGGTTTGCTTGGCATGTATGGGGCATTTTTGAAGCTAATTTGGGCAACATTGACAAGGGAAGAAAACTTCTAAAGATAGGCCATGCTCTTAATCCAAGGGATGCTGTTCTCCTTCAGTCCCTTGCATTATTAGAATACAAACACTCGACTGCGAATTTAGCTAGGGTTTTGTTCAGGAGAGCATCTGAGTTGGATCCAAAGCACCAGCCAGTTTGGATAGCTTGGGGTTGGATGGAATGGAAGGAAGGAAACTTAAATACAGCTAGAGAATTATACCAAAAAGCGTTATCAATTGATTCAAACAGTGAAAGTGCAGCCCGGTGTCTTCAGGCTTGGGGTGTTCTGGAGCAGAGGGCTGGTAATATGTCAGCTGCTCGCAGATTATTTAGATCGTCATTGAATATAAATTCTCAGAGTTTTGTGACCTGGATGACTTGGGCATCAATGGAGGAAGATCAAGGAAATTCAGTACGCGCTGAGGAGATCCGCGACCTCTATTTTCAGCAGCGCACAGAAGTTGTCGATGATGCTTCGTGGGTTATGGGATTCTTAGACATTATAGACCCAGCCATAGACAGTTTGAAGAGGCTCCTAAAGCTGGACCAGAACTTGTACAGCACACCATCACTGGATTCTCTGAGAAAAATTGCAGGAACAACTGCTAATAATAGCATTGATTTAGAATCATCCAGCCCTTCTTCTAGCAGCATTGACAGTAACGATGCGAATACCGAAAGTGGTTTCGATGTGGATGCTTTCGTCATGGAAAGGTTATCCTTAGACACTTCCAGGCTTGAAGCTCAGTTGGAAACAACTAGAaattctttcccaaagaaaagtATTTCTCCAAGAAGAATATGGAGATCAAACAACAAGCTGCCAAAGTCTAACCTCACAAGATAG 2058 0.4427 MNTFLLSSSSSSPSSSSTSSPSNFTIITHSQNPNHLFKFTFKLPVLPLHSTTTTTTTSPSYHHSTVTPLCSSLRDSSSATVLEKKPVFIRPAPDGVVSSKERPDGNGAVSAEESNLDAVLVVRRPVKEVGDEGGREEEDDGDEAKESAIDAGLTKMAKKMPMFEPERVESESKERMLGVNLDLALYRAKVLARNFRYEEAETMLRKCIQNWPEDGRPYVALGKILSKQSKTGQAREVYEKGCQATQGENAYIWQCWAVLEKKMGNIRRARELFDAATVADKRHVAAWHGWAVLELKQGNIKKARNLLAKGLKHCGRNEYIYQTLALLEARANRYQQARYLFKQATKCNPKSCASWLAWAQLEMQQENNRAARQLFEKAVDASPKNRFAWHVWGIFEANLGNIDKGRKLLKIGHALNPRDAVLLQSLALLEYKHSTANLARVLFRRASELDPKHQPVWIAWGWMEWKEGNLNTARELYQKALSIDSNSESAARCLQAWGVLEQRAGNMSAARRLFRSSLNINSQSFVTWMTWASMEEDQGNSVRAEEIRDLYFQQRTEVVDDASWVMGFLDIIDPAIDSLKRLLKLDQNLYSTPSLDSLRKIAGTTANNSIDLESSSPSSSSIDSNDANTESGFDVDAFVMERLSLDTSRLEAQLETTRNSFPKKSISPRRIWRSNNKLPKSNLTR 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1535 685 Coils Coil 640 660 - -
Sto12g1535 685 SMART hat_new_1 434 466 IPR003107 GO:0006396
Sto12g1535 685 SMART hat_new_1 264 296 IPR003107 GO:0006396
Sto12g1535 685 SMART hat_new_1 366 398 IPR003107 GO:0006396
Sto12g1535 685 SMART hat_new_1 468 503 IPR003107 GO:0006396
Sto12g1535 685 SMART hat_new_1 505 537 IPR003107 GO:0006396
Sto12g1535 685 SMART hat_new_1 332 364 IPR003107 GO:0006396
Sto12g1535 685 SMART hat_new_1 229 262 IPR003107 GO:0006396
Sto12g1535 685 SMART hat_new_1 298 330 IPR003107 GO:0006396
Sto12g1535 685 SMART hat_new_1 400 432 IPR003107 GO:0006396
Sto12g1535 685 Gene3D Tetratricopeptide repeat domain 250 590 IPR011990 GO:0005515
Sto12g1535 685 ProSiteProfiles TPR repeat profile. 318 351 IPR019734 GO:0005515
Sto12g1535 685 Pfam Tetratricopeptide repeat 324 385 - -
Sto12g1535 685 Pfam Tetratricopeptide repeat 262 309 - -
Sto12g1535 685 SUPERFAMILY TPR-like 199 430 IPR011990 GO:0005515
Sto12g1535 685 MobiDBLite consensus disorder prediction 126 146 - -
Sto12g1535 685 ProSiteProfiles TPR repeat profile. 454 487 IPR019734 GO:0005515
Sto12g1535 685 PANTHER PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107 9 677 IPR044624 GO:0003729|GO:0006397
Sto12g1535 685 SUPERFAMILY TPR-like 388 589 IPR011990 GO:0005515
Sto12g1535 685 Pfam Tetratricopeptide repeat 461 486 IPR019734 GO:0005515
Sto12g1535 685 Gene3D Tetratricopeptide repeat domain 179 249 IPR011990 GO:0005515
Sto12g1535 685 SMART tpr_5 352 385 IPR019734 GO:0005515
Sto12g1535 685 SMART tpr_5 181 214 IPR019734 GO:0005515
Sto12g1535 685 SMART tpr_5 215 248 IPR019734 GO:0005515
Sto12g1535 685 SMART tpr_5 420 453 IPR019734 GO:0005515
Sto12g1535 685 SMART tpr_5 250 283 IPR019734 GO:0005515
Sto12g1535 685 SMART tpr_5 491 524 IPR019734 GO:0005515
Sto12g1535 685 SMART tpr_5 284 317 IPR019734 GO:0005515
Sto12g1535 685 SMART tpr_5 386 419 IPR019734 GO:0005515
Sto12g1535 685 SMART tpr_5 454 487 IPR019734 GO:0005515
Sto12g1535 685 SMART tpr_5 318 351 IPR019734 GO:0005515
Sto12g1535 685 MobiDBLite consensus disorder prediction 608 628 - -
Sto12g1535 685 MobiDBLite consensus disorder prediction 1 21 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1535 - - mtr:MTR_4g122060 920.228
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1535 12 10654338 10660238 Sto12g1535 12 10654338 10660238 ECH