Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1534 aTGGTTGCAGTTGACTGCATTGACTGTGCAGCTGATGCATCAGTGGTCAATGCAGTGAATGAGGGAATTGAGATAGCAAGAGACATTAAAAGCCTTCGAAGGCCATGGCTGATGATTAGTGTAAATGATGATGAAGATCTTCATTTTCGTAAAGCTGAATTTGATCCAGAAGATTGTCCAGCAGACTGTTCAAGACCCTGTGAAACTGTATGCCCTGCTAATGCAATAGCATTCCATCAGAATACAACATTAGGAATTTCCAATGGAGCTGGAACACCAAGAATGCTaaagGACGGAGTCATAACTGAACGCTGCTATGGTTGTGGCCGTTGCTTTCCAGTGTGCCCCTATGATAAAATAAGAGAGGTAACATATGTAAGGGATGCTATTGCAACTGCTGATCTCATGAAGAGAGATGATGTTGATGCTATAGAGATCCATACAAGTGGGAGGCAGACTTCTCTCTTCAAGGAACTCTGGAGTGCTCTGGGAGATTCAGTTGGATATTTGAGACTCATAGCAGTTAGCTTACCTAATGCTGGGGATTCAACAATATCCACTATGAATGAAATATTTTCTATCATGAAACCCAATCTTCAAAGCTTCAATCTATGGCAGTTGGATGGCCGACCCATGAGTGGTGATATTGGGAGAGGAGCCACTAAGGAATCAATTGCCTTTGCTGTTCAAATGGCCAATGCAAGAGTCAGACCTCCTGGTTTCCTTCAACTGGCCGGTGGAACCAATGCTTACACAATCGATGGGTTGAAGAAAGAAGGCCTTTTTCAAACACCCAGTGTTAACAAGTATTCTGATAATGCAACCTCAACAAATGGTTCAGCTAATTCATCACAAGCTTTAATTGGTGGTGTTGCTTATGGGGGCTATGCGCGGAAGATTGTTGGAAGAGCATTAAGAGCCATGCAATCCCAACATGGTGTAGCTGCTTGTGTTGAGGATCATCCACAGCATCTCTTGGTGGCTCTTGAGGAAGCCCTTGCTTTGGTTGGACCTTTTAAGTTCCTATGA 1029 0.4334 MVAVDCIDCAADASVVNAVNEGIEIARDIKSLRRPWLMISVNDDEDLHFRKAEFDPEDCPADCSRPCETVCPANAIAFHQNTTLGISNGAGTPRMLKDGVITERCYGCGRCFPVCPYDKIREVTYVRDAIATADLMKRDDVDAIEIHTSGRQTSLFKELWSALGDSVGYLRLIAVSLPNAGDSTISTMNEIFSIMKPNLQSFNLWQLDGRPMSGDIGRGATKESIAFAVQMANARVRPPGFLQLAGGTNAYTIDGLKKEGLFQTPSVNKYSDNATSTNGSANSSQALIGGVAYGGYARKIVGRALRAMQSQHGVAACVEDHPQHLLVALEEALALVGPFKFL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1534 342 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 3 337 IPR013283 -
Sto12g1534 342 PANTHER ATP-BINDING CASSETTE SUB-FAMILY E MEMBER 1 3 337 - -
Sto12g1534 342 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 96 125 IPR017896 -
Sto12g1534 342 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 50 81 IPR017896 -
Sto12g1534 342 SUPERFAMILY 4Fe-4S ferredoxins 34 123 - -
Sto12g1534 342 Gene3D - 22 137 - -
Sto12g1534 342 Pfam Iron-Sulfur binding protein C terminal 136 337 IPR021039 -
Sto12g1534 342 ProSitePatterns 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 105 116 IPR017900 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1534 - - gmx:100804088 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1534 12 10646377 10649984 Sto12g1534 12 10646377 10649984 ECH