Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1529 ATGGAAAACCCAAGAACCTCCACTTTCAACCAATTCGACGTCGTTTCGCAAGTCCCAGATCACCACTTCCACCTCTCCTCCTTCAACGGCTCAGATCGCTTCACCGATTGCCGCGGCGCCGTCTATAAAAAGATAATGCAAGAATGGCGGATCCTCCAGAGGAATCTACCCGAATCCATCTTCGTCCGGGTCTCCGAGACCCGAATCGACCTCCTCCGCGCCGCCATCATCGGCGCCGCCGGAACCCCCTACCACGACGGCCTCTTCTTCTTCGACATCGCCTTCCCGCCCGATTACCCCTCCCAACCACCCAAGGTCCACTACCGCTCATTCGGATTCTCACTCAACCCGAACCTCTACTACTCCGGCCACGTCTGCCTGAGCCTCCTCAACACGTGGCGCGGCCAGACCTCCGAGCGGTGGAACCCTACCCAATCGACGGTGCTCCAGGTTCTTCTCTCCATCCAGAGCCTCGTCCTCTGCGAGAATCCCTACTTCAACGAACCGGTGGTGCGCCCTTTCAAATCGTCGCTAACCGTAGCGTCGCAGAAGTACGATCGCCACGCCTTCGTCTTGACCTGCAAATCCGCGATCCAATTGATTCGGAATCCTCCGGAGGGATTCGAGCCCTTGGTGAAGGCGCATTTCCGCGAGCGAGCGAATGCGATTCTGGCGGCGATTCAAGCCTACGCGAACGGGCGCGCGAGGGTAGGGTTTTACCGCGACGGAGGATCATCGGGCCAGCCGGGTAAGATATCGGGGTCGTTCCTGGAGAGTATGGAGTGGGTGTATCCGTCGATGGTGGAGAAGTTTAGGGGGATCGGAGCTCCGGTGGAGAGTGCGGCGGAGGCACTGAGGTTGGGAGCGGAggcgatgaagaagaagatggagattgCGAGGCGGAAGAGAGAAGGGATTCAAGGAGCGAGGTCAAAATGA 939 0.5729 MENPRTSTFNQFDVVSQVPDHHFHLSSFNGSDRFTDCRGAVYKKIMQEWRILQRNLPESIFVRVSETRIDLLRAAIIGAAGTPYHDGLFFFDIAFPPDYPSQPPKVHYRSFGFSLNPNLYYSGHVCLSLLNTWRGQTSERWNPTQSTVLQVLLSIQSLVLCENPYFNEPVVRPFKSSLTVASQKYDRHAFVLTCKSAIQLIRNPPEGFEPLVKAHFRERANAILAAIQAYANGRARVGFYRDGGSSGQPGKISGSFLESMEWVYPSMVEKFRGIGAPVESAAEALRLGAEAMKKKMEIARRKREGIQGARSK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1529 312 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 5 292 - -
Sto12g1529 312 Pfam Ubiquitin-conjugating enzyme 45 188 IPR000608 -
Sto12g1529 312 CDD UBCc 42 193 IPR000608 -
Sto12g1529 312 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 38-RELATED 5 292 - -
Sto12g1529 312 SMART ubc_7 43 198 - -
Sto12g1529 312 SUPERFAMILY UBC-like 37 205 IPR016135 -
Sto12g1529 312 Gene3D Ubiquitin Conjugating Enzyme 1 246 IPR016135 -
Sto12g1529 312 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 40 198 IPR000608 -
Sto12g1529 312 Coils Coil 282 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1529 Sto-Chr12 10595798 10596844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1529 1 276 Miscellaneous Gene Families AT2G33770 49.645 4.76e-74 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1529 K10581 - cit:102616731 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1529 12 10595798 10596844 Sto12g1529 12 10595798 10596844 ECH