Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1512 ATGGATATAAACAACGACCTGAAGAATCTCAAACTCGAGGACACACCTATGCAAATGGATTCCGATGACTCTTCCGGCGTCCAGgGGAAGGGCAAAGAAAAAATGGACATTGCGGAGACAATGAACAAACTGCGTATTGAAGGATCATCATCTGGGGATGGAGttaatttcaaaagaaaacCGGTTATTATTATAGTTGTTGGAATGGCAGGGAGTGGGAAAACGACGTTTCTCCATCGTTTGGTTTGCCATACACAAATGTCGAACATAAGGGGTTATGTGATGAATCTTGACCCTGCTATCTTGACACTCCCGTTTGGTGCTAACATTGATATAAGAGACACTGTTAAGTACAAGGAAGTCATGAAGCAGTTCAACCTTGGTCCAAATGGTGGAATTTTGACATCGCTTAACTTGTTTGCTACAAAGTTTGATGAGGTAATTTCTATTATTGAAAAGCGAGCAGACGAGCTTGATTATGTTCTTGTGGATACCCCTGGTCAGATTGAGATATTCACTTGGTCTGCTTCTGGTGCTATCATTACAGAAGCTTTTGCCTCCACGTTTCCTACCGTAGTAACTTACGTAGTTGACACACCCCGTTCAGAAAATCCTACTACGTTTATGAGCAACATGCTTTATGCTTGTAGTATCCTCTACAAGACACGCTTACCTCTCATATTGGCATTCAACAAAGTCGATGTAGCACGGCATGAGTTTGCCTTGGAGTGGATGGAGGATTTTGAGGCATTTCAAGCAGCAATAAGTTCAGATCACTCTTACACTTCGACTTTAACTCAGAGCCTTTCTCTTGCGCTGGATGAGTTTTACAAGAATTTAAGGTCTGTAGGAGTTTCTGCAGTCTCTGGTGCTGGAATTGACGCCTTCTTTAAGGCCATTGAAGCCAGTGCAGAGGAGTACATGGAAAACTACAAGGCTGATCTCGATAAAAGACGAGCTGAGAAGCAACGTTTGGAGGAAGAACGCAGGAAGGAGAACATGGATAAATTGAGAAGGGACATGGAGAAATCCACAGGAGAAACCGTAGTCTTGAGCACTCGTAGTTTTAATGAAGACGAGGAagacgaggaagaagaagaggaaatggATGATGAGGATTTGGGGAGACTttctgaagatgatgatgcTATTGATGAGGATGAAGATGAGGAGGTTGCTAAGTTTTCcttctaa 1194 0.4054 MDINNDLKNLKLEDTPMQMDSDDSSGVQGKGKEKMDIAETMNKLRIEGSSSGDGVNFKRKPVIIIVVGMAGSGKTTFLHRLVCHTQMSNIRGYVMNLDPAILTLPFGANIDIRDTVKYKEVMKQFNLGPNGGILTSLNLFATKFDEVISIIEKRADELDYVLVDTPGQIEIFTWSASGAIITEAFASTFPTVVTYVVDTPRSENPTTFMSNMLYACSILYKTRLPLILAFNKVDVARHEFALEWMEDFEAFQAAISSDHSYTSTLTQSLSLALDEFYKNLRSVGVSAVSGAGIDAFFKAIEASAEEYMENYKADLDKRRAEKQRLEEERRKENMDKLRRDMEKSTGETVVLSTRSFNEDEEDEEEEEEMDDEDLGRLSEDDDAIDEDEDEEVAKFSF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1512 397 MobiDBLite consensus disorder prediction 321 397 - -
Sto12g1512 397 PANTHER XPA-BINDING PROTEIN 1-RELATED 26 393 IPR004130 -
Sto12g1512 397 Coils Coil 308 340 - -
Sto12g1512 397 PANTHER GPN-LOOP GTPASE 26 393 - -
Sto12g1512 397 Pfam Conserved hypothetical ATP binding protein 66 304 IPR004130 -
Sto12g1512 397 MobiDBLite consensus disorder prediction 11 32 - -
Sto12g1512 397 Gene3D - 61 319 IPR027417 -
Sto12g1512 397 MobiDBLite consensus disorder prediction 357 397 - -
Sto12g1512 397 CDD GPN1 62 302 - -
Sto12g1512 397 MobiDBLite consensus disorder prediction 321 345 - -
Sto12g1512 397 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 301 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1512 Sto-Chr12 10436870 10439520 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1512 K24104 - qsu:111983141 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1512 12 10436870 10439520 Sto12g1512 12 10436870 10439520 ECH