Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1511 ATGGCGAAACACGAAGAGCTTCCGATTCCCGTTTTCGATTCACTGGAACCTGTGTACGGCGAAGGATCTCAGCTCCAAGAAGCTCGTCTTCGTTTTCACAATTTGAAGTCCAAGTTTCTCACTATCTTCGCTCACCTTCCTCAACTCTTCGCTCGTTCACCtggtcctctctctctctcgtttgaCTATTACTATCTGTATTCTGTTTGGATCCTGAGAAACTCGGGGGATACattttatatgtttaatttttcttcttctatttttcGGAACTCTGGGAGAGTGAACTTGATTGGAGAGCACATTGACTATGAGGGATATTCAGTGTTGCCCATGGCAATTCGGCAAGATACAATTGTGGCAATTCGAAAAAATGAGGACGAAAAGATTATTAGGGTTGCTAATGTGAATGATGAGAAATATACCATTTGTACTTATCCTGCTGATCCTGATCAGGAACTCAACTTGAAGGATCACAAATGGGgccattattttatttgtggGTACAAAGGTTATTATGACTATGCAAAGCTCAAAGGAGTGGATGTTGGTCAACCAGTTGGACTTGATGTCCTTGTCGATGGAATTGTTCCTACAGGTTCTGGACTATCAAGCTCTTCAGCATTTGTATGTTCTTCCATGATAGCTATTATGGCTGCTTTTGGTATAAACTTTCCGAAGAAAGAAATTGCACAAGTTACATGTGAATGCGAACGACATGTTGGAACACAATCTGGAGGGATGGATCAGGCAATCTCTGTCATGGCCAAAACTGGGTTTGCAGAGTTGATTGATTTCAACCCTCTTCGTGCGACAGATGTTCAACTTCCTGCTGGTGGGACTTTTGTAATAGCCCACTCTTTGGCAGAGTCTCAAAAGGCTGTCACTGCTGctacaaattataataatagGGTTGTTGAATGTCGTTTGGCTTCTATAGTGCTTGCTATAAAGCTAGGAATGAAACCAGCAGAGGCAATATCAAGAGTGAAAACACTGTCTGATGTTGAAGGGTTATGCGTATCATTTGCTAGCAGTCACAAATCTTCTGATCCTGTTCTTGCTATCAAGGAATTTTTGAAGGAAGAACCATATACAGCCGAAGACATTGAGAACATTACTGATGAGAAGCTTACCTCACTGTTCAGCAGTAATCCAGCTTATTTGAATGTCATAAAAGTTGCTAAGCACTACAAGTTACATCAGGATCACCAACTTGTCCCTTTTATCCAGAGAGCTGCCCATGTGTATTCAGAAGCCAAGAGAGTACACACTTTCAAAAATATCGTATCATCAAATTCAAGTGAGGAGGAGATGCTGAAGAAGCTTGGTGACCTTATGAATGAAAGTCATTATAGCTGCAGCGTTTTATATGAATGCAGCTGTCCCGAGTTGGAAGAACTCGTGAATATTTGTCGTGACCACGGTGCTCTCGGGGCGAGGCTCACCGGAGCTGGATGGGGTGGTTGCGCTGTTTCTTTGGTTGAAGAGAGCATTGTCCCAGAGTTTATCCTGAATTTGAAGAAAAGTTTCTACCAGTCTAGAATTGACAGGGGCATCGTCAGCCAAAAAGATCTTGACCTTTATGTATTTGCTTCCAAGCCCTCAAGTGGTGCTGCCATTTTGAAGCTCTAG 1635 0.4061 MAKHEELPIPVFDSLEPVYGEGSQLQEARLRFHNLKSKFLTIFAHLPQLFARSPGPLSLSFDYYYLYSVWILRNSGDTFYMFNFSSSIFRNSGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRKNEDEKIIRVANVNDEKYTICTYPADPDQELNLKDHKWGHYFICGYKGYYDYAKLKGVDVGQPVGLDVLVDGIVPTGSGLSSSSAFVCSSMIAIMAAFGINFPKKEIAQVTCECERHVGTQSGGMDQAISVMAKTGFAELIDFNPLRATDVQLPAGGTFVIAHSLAESQKAVTAATNYNNRVVECRLASIVLAIKLGMKPAEAISRVKTLSDVEGLCVSFASSHKSSDPVLAIKEFLKEEPYTAEDIENITDEKLTSLFSSNPAYLNVIKVAKHYKLHQDHQLVPFIQRAAHVYSEAKRVHTFKNIVSSNSSEEEMLKKLGDLMNESHYSCSVLYECSCPELEELVNICRDHGALGARLTGAGWGGCAVSLVEESIVPEFILNLKKSFYQSRIDRGIVSQKDLDLYVFASKPSSGAAILKL 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1511 544 Pfam GHMP kinases N terminal domain 190 255 IPR006204 GO:0005524
Sto12g1511 544 ProSitePatterns Galactokinase signature. 93 104 IPR019741 -
Sto12g1511 544 Pfam GHMP kinases C terminal 440 512 IPR013750 -
Sto12g1511 544 Gene3D - 87 274 IPR014721 -
Sto12g1511 544 ProSitePatterns GHMP kinases putative ATP-binding domain. 197 208 IPR006203 GO:0005524
Sto12g1511 544 PANTHER BNAA01G32760D PROTEIN 1 61 - -
Sto12g1511 544 PANTHER BNAA01G32760D PROTEIN 82 542 - -
Sto12g1511 544 Gene3D - 300 459 - -
Sto12g1511 544 PRINTS Mevalonate kinase family signature 91 115 - -
Sto12g1511 544 PRINTS Mevalonate kinase family signature 195 217 - -
Sto12g1511 544 PRINTS Mevalonate kinase family signature 237 256 - -
Sto12g1511 544 PRINTS Mevalonate kinase family signature 479 496 - -
Sto12g1511 544 Gene3D - 275 513 - -
Sto12g1511 544 PIRSF Galactokinase 23 63 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Sto12g1511 544 PIRSF Galactokinase 77 544 IPR006206 GO:0005524|GO:0005737|GO:0016301|GO:0016773
Sto12g1511 544 TIGRFAM gal_kin: galactokinase 87 516 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Sto12g1511 544 PANTHER MEVALONATE KINASE/GALACTOKINASE 82 542 - -
Sto12g1511 544 PANTHER MEVALONATE KINASE/GALACTOKINASE 1 61 - -
Sto12g1511 544 SUPERFAMILY GHMP Kinase, C-terminal domain 281 541 IPR036554 -
Sto12g1511 544 Pfam Galactokinase galactose-binding signature 87 124 IPR019539 -
Sto12g1511 544 PRINTS Galactokinase signature 93 111 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Sto12g1511 544 PRINTS Galactokinase signature 188 206 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Sto12g1511 544 PRINTS Galactokinase signature 411 425 IPR000705 GO:0004335|GO:0005524|GO:0006012|GO:0046835
Sto12g1511 544 SUPERFAMILY Ribosomal protein S5 domain 2-like 92 278 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1511 Sto-Chr12 10427735 10434980 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1511 K18674 - gmx:100803230 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1511 12 10427735 10434980 Sto12g1511 12 10427735 10434980 ECH