Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1481 TTGTTGAAAGAGATTGAAACTATAAGCAAAGCTCTGTATTTGGATAAGAGGTTTTCGAGGAATCCAGTGTCTACTGCTAATGTTCGATCCAAATCTGCTGGGAAAGCACACTTACCTGACCCCAAATCGAAGCATACAGCTAGTAATGAAGACCCTTCACGCAAGGATAAGAAGTCCATTTGGAATTGGAGGCCATTAAAGGCCTTATCTCATATCCGTAATCGGAGGTTTAACTGTAGTTTTTCTCTCCAAGTCCATTTGATTGAAAAGTTGCCTTCGACTTTCAATGATGCTAGCCTTCGTGTATATTGGAAGAGGCGTGATGGGGTTTTGGTGACCCGTCCAGCTAAGGTAGTAGAAGGGGTTGCCCAATTTGAAGAGAAGTTGAATTACACTTGCTCAGTGTATGGCAGTAGGAGTGGACCTCACCATTCAGCAAAATATGAAGCAAAGCATTTTTTACTCTATGCTTCTATTCTCAGCGCACCGGAGCTTGATTTGGGGAAACACCGGGTAGACCTCACAAGGTTGCTTCCTCTTACTCTGGAAGAGCTTGAGGAGGAGAAGAGCACAGGGACATGGACTACAAGTTTTAGATTATCAGGAATGGCCAGGGGTGCTGTAATAAATGTCAGTTTTGGGTATTTGGTGGTTGGTGATAATGCTAATGCTACTAGAGACAACCATAATGTTAACAACGCATTGACTTCAAGGCGTGTTGGAAGTGTGCCAAGTTTTACCAAACAGTATTCTCCTCGAACTGTAGATGAGGTTAAGGATCTTCATGAGGTTTTGCCAACGTCAAAGTCGGCACTGGCAAGCTCAATAGACATCTTATATCAGAAATTTGATGAGGAAAAGGCTAATAGTCCAGAGCACGACAAACCTGAACTTGATTCGTTCACAGAGAATCTTGAGCCAATCAAGCCTAATGCATTTCCATTGTCTGATCCTGGAAGAGAAGCATCCGAAGAGAGTGTAGGTGATGAAGAAAAGAACTGTAGTACCGTGCCTGAAGAAACTGAACTTCACACATTTCAAGAAAACCTGGAGCCAATTGAATCTGATGCCTACCCTCTATCTGATTTGAATGAAAATCCTGAAGAGTGTGAAGTTAAACATGATTCCCTGGATGAAGAAAATGATACTTCTAAGGAGAAGGCTACAGTAAACAAATGCACATCTGAAGAGGATGACTCATTTGCTAAAGAGCTGCTCATGCAAGAATTAGAATTGGCTTTAAATAGCATTTCAGATTTGGAGGCAGAAGCACTAGATTCTCCCAAAGGTGAGAATTATATGGAAGCCAAATCTGAATATAAAATGAGAAAATCACATAGCTTGGATGATATCACCGAATCAGTTGCAAGTGAATTTTTAAGCATGCTAGGTGCAGACCATAGTCCATTGGGCTTGAGTTCTGAAAGTGAAGCTGAGTCCCCAAGAGAGCGCCTTTTAAGACAATTTGAGATGGAGGCTCTGGCCGAGGGTTTCTctttatttgattttgaaaCTGGCGATGATGATGAAAATCACGAAACAGAAGGTAGCTATAATGCTCCCATTGCATCTGAACAGTGGAACTTCTCCGAGGACCTGAAGTGTTCATCCTCCTTGCAAGATCTGCTGCGTGAGGGGCGTCCAGTTGAGTCTCAGGAAGTGAGGAGCAAACAGAGGGCTCAGATGGTAGAGGACTTGGAAACGGAAGCCTTGATGCGTCAGTGGGGTTTGAATGAAGATGCTTTTCAGTATTCTCCACCAAAAGAGCCTGCTGGTTTTGGAAGTCCCATTCACTTTCCCCCCGAAGAGCCTCTTACTTTGCCTCCTCTTGCAGAGGGTTTAGGTCCCTTTCTACAGACAAAAGATGGGGGATTTCTACGTTCCATGGATCCCTCATTTTTCAGGAATGCTAAAAGTGGTGGGAGCTTGATTATGCAAGTTTCCACTCCAGTTGTGGTACCTGCAGAAATGGGTTCTGGGATAATGGAGATTTTGCAGCGTTTGGCTTCATTGGGAATTGAAAAGCTCTCAATGCAAGCAAATAAGTTAATGCCTCTGGAGGATATCACAGGGAAGACGATGCAACAAGTGGCGTGGGAAGCAATGCCTCTCTTAGAGGGAACAGAGAGGCAAAATGTGTTGCAGCTCGATTTAATGGCAGGGCAAGATACTGGTGTCCAAAGGGGCTTGACAGGAACATCATCTGGACCAAAGGCTAATAAGTTTAGTTCAAGTTCACTAGGCAATCAGACAAACTCTGAATTTGCTTCACTGGAAGATCTTGCTCCATTGGCTATGGATAAAATTGAAGCACTTTCAGTGGAGGGTTTGAGAATACAATCTGGGATGTCAGATCAGGATGCACCGTCGAACATCGTTGCACAATCCATTGGAGATGTTTCAGCTCTTCAGGGTAAAGGGGCTAATATTGGCGGATCCCTCGGCCTCGATGGAGCTGCAGGTTTGCAACTGTTGGATATGAAAGACAGTGGTGATGGTGTAGAGTCTGTCGATGGGATAATGGGCCTGTCATTAACTCTGGATGAATGGATGAGGTTGGATTCTGGCGAAATTGATGATATGGAAAATATCAGTGAACATACTTCCAAAATTCTAGCTGCCCATCATGCCAACTCTTTCGACTTCTTTCGTGGGAGTTCTAAGGGCGAGAAGAAAAGAGGCAAAGGtagaaaatgtggtttgctggGAAATAATTTTACAGTAGCATTAATGGTGCAACTTCGTGATCCTTTGAGAGATTACGAGCCTGTTGGAACACCGATGCTTGCTCTTATACAAGTCGAGAGGGTGTTCGTCCCACCAAAGCCAAAGATTTACTGTAATGTGTCTGAGATCAAGAACAATAACGACGAAGATGACGAGAGTGAAACTAGAGCAAAGGTGGAATCAAAGGATGACAATAAAGAGGAGAAAACTTCTCAAGAGGAGGAAGTTCCTCAGTTCAGAATCACAGAAGTACATGTTGCCGGTCTGACAACCGAACCTCGGAAAAAGAAGCTTTGGGGTACTTCAACCAACGAAAAGTCCGGTTCGCGCTGGTTGCTTGCTAATGGAATGGGGAAGAACAATAAACCTCCATTAATGAAGTCAAAGGCGGCTGCATCTAAATCTAATAACACTTTGGCTACTACAAAAGTTCAACCTGGAGATACATTATGGAGCATATCATCTCGTGTATATGGTACTGGAGCAAAATGGAAGGAATTAGCAGCACTAAATCCACATATAAGAAACCCTAACGTCATTATTCGAGACGAAAACATAAGATTGAGGTGA 3297 0.4304 LLKEIETISKALYLDKRFSRNPVSTANVRSKSAGKAHLPDPKSKHTASNEDPSRKDKKSIWNWRPLKALSHIRNRRFNCSFSLQVHLIEKLPSTFNDASLRVYWKRRDGVLVTRPAKVVEGVAQFEEKLNYTCSVYGSRSGPHHSAKYEAKHFLLYASILSAPELDLGKHRVDLTRLLPLTLEELEEEKSTGTWTTSFRLSGMARGAVINVSFGYLVVGDNANATRDNHNVNNALTSRRVGSVPSFTKQYSPRTVDEVKDLHEVLPTSKSALASSIDILYQKFDEEKANSPEHDKPELDSFTENLEPIKPNAFPLSDPGREASEESVGDEEKNCSTVPEETELHTFQENLEPIESDAYPLSDLNENPEECEVKHDSLDEENDTSKEKATVNKCTSEEDDSFAKELLMQELELALNSISDLEAEALDSPKGENYMEAKSEYKMRKSHSLDDITESVASEFLSMLGADHSPLGLSSESEAESPRERLLRQFEMEALAEGFSLFDFETGDDDENHETEGSYNAPIASEQWNFSEDLKCSSSLQDLLREGRPVESQEVRSKQRAQMVEDLETEALMRQWGLNEDAFQYSPPKEPAGFGSPIHFPPEEPLTLPPLAEGLGPFLQTKDGGFLRSMDPSFFRNAKSGGSLIMQVSTPVVVPAEMGSGIMEILQRLASLGIEKLSMQANKLMPLEDITGKTMQQVAWEAMPLLEGTERQNVLQLDLMAGQDTGVQRGLTGTSSGPKANKFSSSSLGNQTNSEFASLEDLAPLAMDKIEALSVEGLRIQSGMSDQDAPSNIVAQSIGDVSALQGKGANIGGSLGLDGAAGLQLLDMKDSGDGVESVDGIMGLSLTLDEWMRLDSGEIDDMENISEHTSKILAAHHANSFDFFRGSSKGEKKRGKGRKCGLLGNNFTVALMVQLRDPLRDYEPVGTPMLALIQVERVFVPPKPKIYCNVSEIKNNNDEDDESETRAKVESKDDNKEEKTSQEEEVPQFRITEVHVAGLTTEPRKKKLWGTSTNEKSGSRWLLANGMGKNNKPPLMKSKAAASKSNNTLATTKVQPGDTLWSISSRVYGTGAKWKELAALNPHIRNPNVIIRDENIRLR 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1481 1098 MobiDBLite consensus disorder prediction 954 988 - -
Sto12g1481 1098 ProSiteProfiles C2 NT-type domain profile. 69 217 IPR019448 -
Sto12g1481 1098 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1098 IPR039614 -
Sto12g1481 1098 Coils Coil 403 423 - -
Sto12g1481 1098 MobiDBLite consensus disorder prediction 728 747 - -
Sto12g1481 1098 MobiDBLite consensus disorder prediction 287 302 - -
Sto12g1481 1098 MobiDBLite consensus disorder prediction 287 338 - -
Sto12g1481 1098 MobiDBLite consensus disorder prediction 35 56 - -
Sto12g1481 1098 Gene3D LysM domain 1049 1096 IPR036779 -
Sto12g1481 1098 MobiDBLite consensus disorder prediction 322 338 - -
Sto12g1481 1098 CDD LysM 1052 1089 IPR018392 -
Sto12g1481 1098 SMART LysM_2 1050 1098 IPR018392 -
Sto12g1481 1098 MobiDBLite consensus disorder prediction 24 56 - -
Sto12g1481 1098 Pfam LysM domain 1052 1089 IPR018392 -
Sto12g1481 1098 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 74 219 IPR019448 -
Sto12g1481 1098 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 1-RELATED 1 1 1098 - -
Sto12g1481 1098 ProSiteProfiles LysM domain profile. 1049 1097 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1481 Sto-Chr12 10186954 10190502 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1481 - - gmx:100815106 1371.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1481 12 10186954 10190502 Sto12g1481 12 10186954 10190502 ECH