Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1472 ATGGGGGAAGAAGCAGGTGTAGGTGCTGCTGTAGCAAACGGCCTTAATCATCATCGTCAAGATGGAAGCAGCGATGATCAGAGTCTTGAATTTGATATATATCCTTTGAGCGGCTACTACTTCGGCTCCAAGGATGCAATTCCTTTTAAGGATGAGACGTTAGCTGATCGTGCTCAGAGGATGAAATCTAACTATGCTGCTCATGGACTACGAACTTGTGTGGAAGCCGTTTTACTGGTTGAGTTGTTTAAACATCCACATTTGTTGTTGTTGCAAGTAAGAAATTCCATCTTTAAACTCCCTGGTGGGCGCCTAAGACCAGGTGAATCAGACATTGATGGATTAAAACGTAAGCTGGCAAGGAAGCTTTCTGTTGATGAAGTCGGTGATGGAAGTGAATGGGAGGTGGGTGAATGCCTTGGAATGTGGTGGAGGCCTGGCTTTGAAACCTTACTGTATCCCTATTTGCCACCTAATGTGAAGAGTCCAAAGGAGTGTACAAAACTCTTCGTTGTAAAGCTACCAGAGAGTCGAAAGTTCATTGTGCCCAGAAATTTAAGGTTGCTTGCAGTGCCATTGTGCCAAGTTCACGAAAATCACAAGACATATGGGACAATTATATCAGGGGTCCCACAGCTGCTTTCAAAATTCTCCTTCAACATGATCGAATTCTGA 675 0.44 MGEEAGVGAAVANGLNHHRQDGSSDDQSLEFDIYPLSGYYFGSKDAIPFKDETLADRAQRMKSNYAAHGLRTCVEAVLLVELFKHPHLLLLQVRNSIFKLPGGRLRPGESDIDGLKRKLARKLSVDEVGDGSEWEVGECLGMWWRPGFETLLYPYLPPNVKSPKECTKLFVVKLPESRKFIVPRNLRLLAVPLCQVHENHKTYGTIISGVPQLLSKFSFNMIEF 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1472 224 PANTHER PRE-MRNA CLEAVAGE FACTOR IM 25 KDA SUBUNIT 1 17 223 - -
Sto12g1472 224 PANTHER PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT 17 223 IPR016706 GO:0003729|GO:0005849|GO:0006378
Sto12g1472 224 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 30 221 - -
Sto12g1472 224 PIRSF CPSF-25 6 223 IPR016706 GO:0003729|GO:0005849|GO:0006378
Sto12g1472 224 Pfam Nucleotide hydrolase 31 217 IPR016706 GO:0003729|GO:0005849|GO:0006378
Sto12g1472 224 ProSiteProfiles Nudix hydrolase domain profile. 69 195 IPR000086 -
Sto12g1472 224 SUPERFAMILY Nudix 76 179 IPR015797 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1472 Sto-Chr12 10091452 10095755 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1472 K14397 - gmx:100791216 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1472 12 10091452 10095755 Sto12g1472 12 10091452 10095755 ECH