Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1408 ATGACAAAGAAAACACAATGGGCTTTAGAAGAGCTGAATGCCAATTTCAACAAGCTAACCAAGCTGCCAGAAACTATAGGGTTTGAACTTACCAACCTTAGGAAGCTATCGGTCAACTCCAACAAGCTTGCCTTCCTTCCTCACTCCACCTCTCACCTCACGGCTCTTCGTGTTCTCGATGCTCGCCTGAACTGCCTCCGAGCTCTCCCGGAAGATCTCGAGAATCTCATCAATCTCGAAATCCTAAACGTGAGCCAAAACTTCCAATACTTAGAAACCCTACCTTACTCCATAGGGCTTCTTTGGTCCCTTGTAGAGCTAGACGTTAGCTACAATCGAATCAAGTCATTGCCGGATTCTATAGGCTGCCTCAAGAAGCTGCAGAAGCTGAGCGTGGAGGGGAACCCTTTGAGGTCGCCTCCTGTGGAGGTGGTGCAGCAGGGTGTGCATGCAATTAAAGAGTATTTAGGACAGAAGTTGAGCTCGGGGCACGAGAGTCCAACCAAAAAGAAGTCTTGGATGGGGAAGTTAGTTAGGTATAGCACTTTCAATGGATCGCGTAAGAGTGGACCTCGAGAGGATCGCGATGATTTTACTGCCGTGCCAGATTATCGTTCAATCCAAGGTCTCGCTTCTCCAAGTTTGATAGGCATGTTCTCGCCGCGTCGCCTCTTCTCACCCCGTAGTTACTTCAGTAATTGA 702 0.4843 MTKKTQWALEELNANFNKLTKLPETIGFELTNLRKLSVNSNKLAFLPHSTSHLTALRVLDARLNCLRALPEDLENLINLEILNVSQNFQYLETLPYSIGLLWSLVELDVSYNRIKSLPDSIGCLKKLQKLSVEGNPLRSPPVEVVQQGVHAIKEYLGQKLSSGHESPTKKKSWMGKLVRYSTFNGSRKSGPREDRDDFTAVPDYRSIQGLASPSLIGMFSPRRLFSPRSYFSN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1408 233 Gene3D Ribonuclease Inhibitor 4 152 IPR032675 -
Sto12g1408 233 SUPERFAMILY L domain-like 8 143 - -
Sto12g1408 233 SMART LRR_bac_2 30 49 - -
Sto12g1408 233 SMART LRR_bac_2 6 25 - -
Sto12g1408 233 SMART LRR_bac_2 53 72 - -
Sto12g1408 233 SMART LRR_bac_2 76 97 - -
Sto12g1408 233 SMART LRR_bac_2 101 120 - -
Sto12g1408 233 SMART LRR_bac_2 124 143 - -
Sto12g1408 233 Pfam Leucine rich repeat 78 137 IPR001611 GO:0005515
Sto12g1408 233 Pfam Leucine rich repeat 9 62 IPR001611 GO:0005515
Sto12g1408 233 PANTHER LEUCINE-RICH REPEAT-CONTAINING 7 226 - -
Sto12g1408 233 SMART LRR_typ_2 101 123 IPR003591 -
Sto12g1408 233 SMART LRR_typ_2 53 76 IPR003591 -
Sto12g1408 233 SMART LRR_typ_2 8 29 IPR003591 -
Sto12g1408 233 SMART LRR_typ_2 30 52 IPR003591 -
Sto12g1408 233 SMART LRR_typ_2 124 147 IPR003591 -
Sto12g1408 233 ProSiteProfiles Leucine-rich repeat profile. 103 124 IPR001611 GO:0005515
Sto12g1408 233 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 7 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1408 Sto-Chr12 9568395 9569320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1408 15 137 Receptor kinase-like Gene Family AT5G07280 35.433 3.17e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1408 - - zju:107432570 342.813