Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1199 ATGGACCCTTATTCAGAGGCACTCCTGAGTTTGAAATCTGAACTTGTGAGTGATGATGATAGTTTACATGACTGGGTGGTGGTGCCTGTAGGAGGAAACTTGAGTGGTAAATCCTATGCTTGTTGTTCTTGGTCTGGAATCAAGTGTGATAAGGACTCAACAACTGTAACCTCCATAGACCTGTCCATGAAGAAACTTGGAGGTGTAATGTCAGGGAAGCAATTCAGTGTCTTCACAAAGCTTGAATATCTCAACCTGAGTCACAATTTCTTCTCTGGGCAGCTTCCTGTGGAAATTTTCAACCTCACCAGTTTAAGAAGTTTGGACATAAGCAGAAACAATTTCTCTGGTCATTTTCCAGGTGGGATTTCCAGCCTTCAAAACTTGAGTGTGCTTGATGCATTCAGCAACAGCTTTTCTGGGCCATTGCCTGTTGAACTTTCTCAGCTTGAAAATCTCAAGGTTCTTAATCTAGCTGGGAGTTACTTCAGAGGACCAATCCCATCTGAATACGGTTCTTTTAGAAGCCTTGAATTTCTTCATCTTGCAGGAAATCTTCTCTCTGGGAATCTACCTCCAGAACTGGGTAATCTCAAAACAGTCACCCACATGGAAATTGGCTACAACATCTACCAAGGTCATATCCCACTTCAATTAGGTAACATGAGTGAACTCATATATCTTGATATTGCTGGTGCAAATCTATCTGGTTCAATACCAAAGCAACTCTCCAATCTCACCAATTTGCAGTCACTTTATCTATTCAGAAACCAACTCACAGGTTCAATACCAAGTGAGTTTAGCAATATCAAGTCACTGGttaatttagatctttctgACAATCTCATTTCTGGGTCCATTCCTGAAAGCTTCTCAGAGTTGGAGAACCTGAGGTTGCTTAGTCTCATGTGCAATGATATGAATGGCACTGTTCCTGAAGGCATTGCAAAGCTTCCAAACTTGGAAACTCTTCTCATTTGGAATAATTTCTTCTCTGGGTCGCTTCCACAGAGCTTGGGCAAGAACTCAAATCTCATGTGGGTGGATGTTTCCACAAATGACTTCGTTGGAAGCATACCAACAGATATTTGTGTGAGAGGTGGTCTTTCACCATCTCTCTCCAACTGTTCTTCCCTTGTTCGTCTTCGCTTAGAAGATAACTTGTTCACTGGGAAGATCGCTTTGAAATTCAGTCATCTTCCAGATATCTCATACGTTGATCTGTCCATGAACAAGTTTATTGGTGGAATTCCCTCAGATATTTCCCAAGCTAGTAAACTCACATATTTCAACGTCTCTGATAATCTGCTATTAGGAGGCACTATCCCTGCAAAAACATGGTCTTTGCCACTTCTGCAAAATTTTTCAGCATCTTCTTGTGGTATTTCAGGAAATCTTCCTCCATTTGAGTCTTGCAAATCAATCTCTGTGATTGAACTTGATAGGAACAACTTGTCTGGAACGATCCCAAAAACTGTTTCAAATTGCCAAGCTCTTGAGAATATAAAGTTATCCAACAACAATCTATCGGGTCCTATACCTGAGGAGCTTGCAAGTATCCCCATTCTTGGTGTTGTAGATCTATCAAACAATAACCTCAATGGCCCTATACCTGCAAAATTAGCAGAATTCAATCAAGCCATGAAAGAAGAACTCTACGCTGATGTCTACAAATTTGGAGAGATAATTCTGGAAATTCTAACCAACGGAAGGTTGACAAATGCAGCAGCAGCAGCTAACATACACAGCAAACCAAAGGAAATTCTCCTCAGAGAAATTTACAATGAGAATGAAGTGGCTTCAGCAAGTTCATTACAAGAAATAAAACTAGTTCTTGAAGTCGCTTTGCTTTGCACCAGAAGCAAGTCATCTGATAGGCCATCCATGGAAGATGCCTTGAAGCTTTTGTCAGGATTGAAGCCTCTAGACTCTAGAGGATAA 1941 0.406 MDPYSEALLSLKSELVSDDDSLHDWVVVPVGGNLSGKSYACCSWSGIKCDKDSTTVTSIDLSMKKLGGVMSGKQFSVFTKLEYLNLSHNFFSGQLPVEIFNLTSLRSLDISRNNFSGHFPGGISSLQNLSVLDAFSNSFSGPLPVELSQLENLKVLNLAGSYFRGPIPSEYGSFRSLEFLHLAGNLLSGNLPPELGNLKTVTHMEIGYNIYQGHIPLQLGNMSELIYLDIAGANLSGSIPKQLSNLTNLQSLYLFRNQLTGSIPSEFSNIKSLVNLDLSDNLISGSIPESFSELENLRLLSLMCNDMNGTVPEGIAKLPNLETLLIWNNFFSGSLPQSLGKNSNLMWVDVSTNDFVGSIPTDICVRGGLSPSLSNCSSLVRLRLEDNLFTGKIALKFSHLPDISYVDLSMNKFIGGIPSDISQASKLTYFNVSDNLLLGGTIPAKTWSLPLLQNFSASSCGISGNLPPFESCKSISVIELDRNNLSGTIPKTVSNCQALENIKLSNNNLSGPIPEELASIPILGVVDLSNNNLNGPIPAKLAEFNQAMKEELYADVYKFGEIILEILTNGRLTNAAAAANIHSKPKEILLREIYNENEVASASSLQEIKLVLEVALLCTRSKSSDRPSMEDALKLLSGLKPLDSRG 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1199 646 Gene3D Ribonuclease Inhibitor 469 547 IPR032675 -
Sto12g1199 646 Gene3D Transferase(Phosphotransferase) domain 1 548 644 - -
Sto12g1199 646 Pfam Leucine rich repeat 57 115 IPR001611 GO:0005515
Sto12g1199 646 Pfam Leucine rich repeat 476 533 IPR001611 GO:0005515
Sto12g1199 646 PANTHER UNNAMED PRODUCT 2 543 - -
Sto12g1199 646 PANTHER UNNAMED PRODUCT 543 641 - -
Sto12g1199 646 Gene3D Ribonuclease Inhibitor 364 468 IPR032675 -
Sto12g1199 646 Pfam Leucine Rich repeats (2 copies) 247 287 IPR025875 -
Sto12g1199 646 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 2 543 - -
Sto12g1199 646 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 543 641 - -
Sto12g1199 646 SUPERFAMILY L domain-like 33 360 - -
Sto12g1199 646 SMART LRR_typ_2 174 198 IPR003591 -
Sto12g1199 646 SMART LRR_typ_2 246 269 IPR003591 -
Sto12g1199 646 SMART LRR_typ_2 78 102 IPR003591 -
Sto12g1199 646 SMART LRR_typ_2 270 293 IPR003591 -
Sto12g1199 646 SMART LRR_typ_2 318 342 IPR003591 -
Sto12g1199 646 SUPERFAMILY RNI-like 335 542 - -
Sto12g1199 646 Gene3D Ribonuclease Inhibitor 168 264 IPR032675 -
Sto12g1199 646 Gene3D Ribonuclease Inhibitor 265 363 IPR032675 -
Sto12g1199 646 Gene3D Ribonuclease Inhibitor 4 167 IPR032675 -
Sto12g1199 646 Pfam Leucine rich repeat N-terminal domain 6 50 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1199 Sto-Chr12 7635601 7638906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1199 543 637 Receptor kinase-like Gene Family AT5G51350 58.333 9.94e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1199 - - gmx:100782323 838.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1199 12 7635601 7638906 Sto12g1199 12 7635601 7638906 ECH