Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1197 ATGGCAGGTGGATTTGCAGGAGGAAGTGGTGGTGTGGGGAAAGAGAGGGCAAATCAGTATAAAGGCAGAGTCACTGCTTATGTGGTCATTGCTTGTGTTGTTGCTGCCACTGGAGGATCTCTCTTTGGCTATGATATTGGGATTTCAGGTGGGGTTACATCCATGGATGACTTCCTTAAAGATTTCTTCCCCACAGTACTCAGACACAAATTGCACGCACATGAAAACAACTATTGCAAGTTCAACAGTCAAGGCCTTGCAGCATTCACGTCTTCTCTCTACCTTGCTGGTTTAGTTGCATCTCTCATGGCTTCTCCGGTCACCAGAATGTATGGCCGGCGGGCAAGTATAATCGGAGGCGGCATCAGCTTCCTTATTGGCTCAGCTCTCAATGCCTCTGCTGTTAATCTTGCAATGCTTCTCTTGGGTCGTATCATGCTTGGTGTTGGCATTGGATTTGGAAATCAGGCTATTCCAGTTTATTTGTCAGAGATGGCACCAACCCATCTTCGAGGAGGCTTGAACATGATGTTTCAAGTAGCAACCACTTTTGGGATTTTTACAGCAAACATGGTAAACTATGGAACACAGAAGCTCAGACCATGGGGGTGGAGGCTGTCCTTGGGTCTAGCTGCAGTACCAGCTCTTTTGATGACAATAGGAGGTATATTTCTTCCTGAGACTCCAAACAGCTTAATAGAAAGAGGATTGAAGGAGAGAGGAAGAAAGCTCCTGGAGAGAATCAGAGGAACAAAAGATGTTGATGCAGAGTTCCAAGATATGGTGGATGCAAGTGAGTTAGCAAACTCAGTGGAACACCCCTTTAGGAACATTCTTCAGAAAAAGTACAGGCCAGAGTTGGTCATGGCAATCTTCATGCCTACATTCCAAATCCTCACTGGCATAAATTCCATTCTTTTCTATGCACCAGTTCTGTTTCAAAGTATGGGTTTTGAAGGAGATGCATCCCTATACTCCTCAGCTACAACTGGAGGAGTTCTTGCTTTCTCAACATTCATTTCCATTGCCACTGTTGATAGATTGGGGAGAAGAGTTCTACTTATCAGTGGAGGAATACAAATGATTACATGTCAGGTAATTGTGGCCATAATCTTGGGTATCAAGTTTGGAGACAACCAAGAACTGTCGAAAGCCTATTCCATATCGGTTGTAGTTGTGATCTGTCTGTTTGTGGTAGCTTTTGGATGGTCATGGGGTCCTCTTGGGTGGACAGTCCCAAGTGAGATATTTCCATTAGAAATTCGATCAGCAGGGCAGAGCATTACAGTTGCTGTTAACCTTCTGTTCACATTCATAATAGCCCAAATCTTTCTCTCCCTCCTTTGTCATTTGAGATTTgggattttcctcttttttgcCGGGTGGATTACCATCATGACCATCTTCGTCTTTGTCTTCCTACCTGAAACAAAAGGAATTCCCATTGAAGAGATGTCTTTTATGTGGAGAAGGCACTGGTTCTGGAAGAGAGTACTGCCTAGAGAACCAGAAGCTGATTCCAATGATTATGGTGTAAAGAGTTCCATAGAGTTAGGAGATGGAGTTTGA 1569 0.4353 MAGGFAGGSGGVGKERANQYKGRVTAYVVIACVVAATGGSLFGYDIGISGGVTSMDDFLKDFFPTVLRHKLHAHENNYCKFNSQGLAAFTSSLYLAGLVASLMASPVTRMYGRRASIIGGGISFLIGSALNASAVNLAMLLLGRIMLGVGIGFGNQAIPVYLSEMAPTHLRGGLNMMFQVATTFGIFTANMVNYGTQKLRPWGWRLSLGLAAVPALLMTIGGIFLPETPNSLIERGLKERGRKLLERIRGTKDVDAEFQDMVDASELANSVEHPFRNILQKKYRPELVMAIFMPTFQILTGINSILFYAPVLFQSMGFEGDASLYSSATTGGVLAFSTFISIATVDRLGRRVLLISGGIQMITCQVIVAIILGIKFGDNQELSKAYSISVVVVICLFVVAFGWSWGPLGWTVPSEIFPLEIRSAGQSITVAVNLLFTFIIAQIFLSLLCHLRFGIFLFFAGWITIMTIFVFVFLPETKGIPIEEMSFMWRRHWFWKRVLPREPEADSNDYGVKSSIELGDGV 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1197 522 ProSitePatterns Sugar transport proteins signature 1. 341 358 IPR005829 GO:0016021|GO:0022857|GO:0055085
Sto12g1197 522 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 9 508 IPR045262 GO:0015144
Sto12g1197 522 ProSitePatterns Sugar transport proteins signature 2. 146 171 IPR005829 GO:0016021|GO:0022857|GO:0055085
Sto12g1197 522 ProSiteProfiles Major facilitator superfamily (MFS) profile. 31 478 IPR020846 GO:0022857
Sto12g1197 522 SUPERFAMILY MFS general substrate transporter 28 485 IPR036259 -
Sto12g1197 522 Gene3D MFS general substrate transporter like domains 20 492 IPR036259 -
Sto12g1197 522 CDD MFS_STP 34 476 IPR044778 GO:0015145|GO:0015749
Sto12g1197 522 PRINTS Sugar transporter signature 39 49 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto12g1197 522 PRINTS Sugar transporter signature 141 160 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto12g1197 522 PRINTS Sugar transporter signature 297 307 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto12g1197 522 PRINTS Sugar transporter signature 391 412 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto12g1197 522 PRINTS Sugar transporter signature 414 426 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto12g1197 522 PANTHER - 9 508 - -
Sto12g1197 522 TIGRFAM SP: MFS transporter, sugar porter (SP) family 24 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto12g1197 522 Pfam Sugar (and other) transporter 32 489 IPR005828 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1197 Sto-Chr12 7621865 7624933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1197 1 513 Organic Solute Cotransporters AT4G02050 77.583 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1197 K24193 - gmx:100820434 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1197 12 7621865 7624933 Sto12g1197 12 7621865 7624933 ECH