Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1196 ATGATATCAGGTGCTCCTGCATCGGGCAAAGGAACCCAATGTGAATTGATTGTGCAGAAGTTTGGGTTGGTTCACATATCAACCGGAGACTTGCTGAGAGCTGAAGTAGCAGCTGGGACTGAGATTGGAAACAAAGCAAAGGAATACATGAATGCTGGTCGCTTGGTTCCAGATGAAATCGTGAATGCTATGGTGACAGCAAGATTATCGCGTGAAGATGCAAAACAAAAAGGGTGGCTTCTTGATGGGTACCCTCGGAGTTCTGCCCAAGCTGAGTCTCTGGAAAAAATGCAGATTCGGCCAGATATCTATATTGTGTTAGATGTTCCTGATGAAATTCTGATCGACAGATGTGTTGGGAGAAGACTAGACCCAGTGACTGGGAagatatatcatataaaaaattttccagCAGAGACTGAAGAAATCAAATCAAGGCTGATTACTCGTCCTGATGACACTGAAGAGAAAGTTAAGTCCCGGCTagaaatatataagaaaaatgcAGAAGCAGTATCTTCCTCTTACTCGAACATAACAAATAAGATCAATGGAAATCGTCCAAAAGAAGTAGTTTTTAAGGAAATTGACTCTTTGCTATCACAAGTGCAAAATGACAAAGTGAAAATGATAAAAGCTGAAAAGTCAATACTTGATATAAAGAAGGGGCAGGAATCTTCAAGCCAGGATAAGTGGAGAGGAATTCCTACTAGACTAAATAACATTCCCCATTCCAGAGAGATCAGGAAGTATTTCTATGATGATGTTCTGCTAGCCACACAGAGGGCTGTAAAAGGTGGAAAAACTCTGTTGAAGGTGGACATCAACATTCCTGAGCTGAACCCAGAAATGGATGTTTATCGAATTGGCACTTTGATGGAACTTGTTCGAGATCTAGCCCTTTCATTTGCTGATGATGGGAAACGTGTTAAGGTTTGTGTACAGGGGTCAATGGGAGAAGGTGCACTTGCTGGAATGCCACTACAGCTTGCTGGAACTCGAAAGATCTTAGAGTTTATGGATTGGGGTGATTATGGTGCAAAAGGgacttttatcaatattggttCCATAGGTGCTGCAGAGGTTGAAGAGCTAGATGACATGTATATTCTAGTGGCTCCTCAAAATGCTGTAGGGAATTGTATTATTGATGATCTAAGAGCCATGACCAATGCTGCTAAACACAGGCCAGTTATCCTAATCAATGCTAGGCTAAAGGATTTACCCGGTTCCAGTGGAATAATGCAAACAATGGGACGGGAGCAGAGACTTGAGTACGCAGCATCTTTTGAAAGTTGCTACTTCTTTCGGCTTCTCTATTATGCAGGAACTCAGTATCCCATAATGGGAGCTCTCAGGATGTCTTATCCGTACCGCTACGAGCTGTACAAGAGGGTGGATGAACCATCCGGAGAGAAATATGTTATGTTGTCAACATTTCCAGAAAGGCCTACTACTGATGAAATTAATGATGTCTTCGAAGGGAAACCTAGGAGTGAAACTAAGAAGGCCTCAGGGATTTGGGGTTTCTTGAGTGGCATTCTTTGA 1548 0.4115 MISGAPASGKGTQCELIVQKFGLVHISTGDLLRAEVAAGTEIGNKAKEYMNAGRLVPDEIVNAMVTARLSREDAKQKGWLLDGYPRSSAQAESLEKMQIRPDIYIVLDVPDEILIDRCVGRRLDPVTGKIYHIKNFPAETEEIKSRLITRPDDTEEKVKSRLEIYKKNAEAVSSSYSNITNKINGNRPKEVVFKEIDSLLSQVQNDKVKMIKAEKSILDIKKGQESSSQDKWRGIPTRLNNIPHSREIRKYFYDDVLLATQRAVKGGKTLLKVDINIPELNPEMDVYRIGTLMELVRDLALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFINIGSIGAAEVEELDDMYILVAPQNAVGNCIIDDLRAMTNAAKHRPVILINARLKDLPGSSGIMQTMGREQRLEYAASFESCYFFRLLYYAGTQYPIMGALRMSYPYRYELYKRVDEPSGEKYVMLSTFPERPTTDEINDVFEGKPRSETKKASGIWGFLSGIL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1196 515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 202 IPR027417 -
Sto12g1196 515 PRINTS Adenylate kinase signature 1 14 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto12g1196 515 PRINTS Adenylate kinase signature 29 43 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto12g1196 515 PRINTS Adenylate kinase signature 79 95 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto12g1196 515 PRINTS Adenylate kinase signature 150 165 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto12g1196 515 PANTHER NUCLEOTIDE KINASE 1 407 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto12g1196 515 Pfam Domain of unknown function (DUF1995) 250 490 IPR018962 -
Sto12g1196 515 ProSitePatterns Adenylate kinase signature. 79 90 IPR033690 -
Sto12g1196 515 Hamap Adenylate kinase [adk]. 1 201 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto12g1196 515 Pfam Adenylate kinase 2 178 - -
Sto12g1196 515 PANTHER ADENYLATE KINASE 5, CHLOROPLASTIC 1 407 - -
Sto12g1196 515 CDD ADK 1 192 IPR000850 GO:0005524|GO:0006139|GO:0019205
Sto12g1196 515 Gene3D - 1 214 IPR027417 -
Sto12g1196 515 TIGRFAM adk: adenylate kinase 1 200 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1196 Sto-Chr12 7611034 7616792 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1196 K00939 - gmx:100818830 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1196 12 7611034 7616792 Sto12g1196 12 7611034 7616792 ECH