Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1167 ATGCCGAAACTGAAGATTGCCGGAACATGGTCTGGAGTGCTTGAGGTAGAGCTCGAGACTTGGACGCTTCGCATGTTGAGGGAAGAAGTCGCTAAGCGATCCAACTGCGGCATCGACTCCATCAATTTGATATGCGCCGGAAAGATTTTGAAGGACGGCGGCGATGGCCAAGAGAAGTTGAGCCAATTCGGTATCAAAAATAACTCCAAAATTCTTGCGAGTCGCATCCATGCTGAAGAAGGCAAGaataatcTTGTTTTACTTCTTGATGAAAGACAACGTGCTTCGAAGATTGCATTGATTAAGGCAGCTGCCACTgcactggcccaaaggcatgcGGATGGTTCTTTACCTGTGGAAGACTTCAACATAGAAGTTGAAGATCAAAGTGGACAAAAAGTACATTTAGGTTCTGAGACAGATCAAAGGGCAGTAATGATGGGACTGATGCTTCATGCAAATGGAAAGCGTCTCATTAGACAACAAAACTACATTGATGCATTAGAAGTGCTCTCTATGGGAGAGGAGGCATTTTCTCTTTGTGATCCGAAGGTCATTGAGCTTATTGACAATGTCCCAATACTGCAAATAGACATGGTGTGGTGCTACTTTATGATCCGAGACATCAGATGGCTTTCAGAGGCAGGAAAGCGTCTTGAAATGGCTAGGGCTGGAATTGAACGTGCTCATGGGAAGGATTCCCACCGTCTTAGACTACTACAGGGAGGTCGCTATCCTGAAGTTGCACTGCGTTTAAGACTGGAGCTACTTGAAGGGGTGGTGGCATACCATAGTGGTATGTTGGATAAATCAAGAGATGCATTGACTTCTGCAAAAGCAAAATTCATTCAGCTGCAAGTGCCAGATGAAGCCTTATCTTTTGTTATGAGCATGGGCTTTAAAGAACGTGATGTAAAGAGAGCATTACGGATGAACAATCAAGATGTGGGGGGTGCCATTGATTTTCTTGAGGAGGAGAAGGCAAAGAAAATACGAAAACGGGAAGAAGATATCCGGAGAAGAAATGAAATTAGGCGACAAAAGCGTTATGGGCTGACACCCTTAAAGAAAGCTGTGGATATTCATAGGTTAAAGGATCTGGTCTCTTTTGAATTTGAGAAGGACCTTGCAGCTGAAGCCCTTCGAAGAAACGAAAATGATTTTGATCAGGCATTGAATGATTTGACGAACCCAGAAACTAAATCTGCCATGCAGGTTCACATTGAGACAAGGAAAAGGAAGAGACTGAGGAAAGCAGCAGAGTCTCACATTGAAAATTTTGTACGCATGGGTTTTGAAAGATCAAGAGGTACTGATGTTATTTATATTCTAAGAATGGCTAGGCTGGCTATACATAGACTGACCATGCAATCTGAGGAAATCCCGGCCTCAGCTGCGGGAACTGAAGCAAATTCATCTTCTGCTGCCAATACCGGTGCCGCTGCTTCTGCTCCTTTACCAGACAACATTGGTTCTAATATGATGCTAGACCTAATTGATGATGTAGAAGGTCTACCAGAAGGTGCAAGCAATGCAGAAGTGCGAGATGTAGAGATGGAAGATGAGCTTTCTGCAGATATAGCAAAAGCCGATGCGTTGGCTGACTATGATATTGAAGTTAATATAGAAGGAGAAGCCATTACTGAGTACCTTGCTCTGGTGGAGTCAGCAGGCAGCAGCCGCATCAGTGGGCAGAAGTTGCATTCCCAGTAA 1713 0.4349 MPKLKIAGTWSGVLEVELETWTLRMLREEVAKRSNCGIDSINLICAGKILKDGGDGQEKLSQFGIKNNSKILASRIHAEEGKNNLVLLLDERQRASKIALIKAAATALAQRHADGSLPVEDFNIEVEDQSGQKVHLGSETDQRAVMMGLMLHANGKRLIRQQNYIDALEVLSMGEEAFSLCDPKVIELIDNVPILQIDMVWCYFMIRDIRWLSEAGKRLEMARAGIERAHGKDSHRLRLLQGGRYPEVALRLRLELLEGVVAYHSGMLDKSRDALTSAKAKFIQLQVPDEALSFVMSMGFKERDVKRALRMNNQDVGGAIDFLEEEKAKKIRKREEDIRRRNEIRRQKRYGLTPLKKAVDIHRLKDLVSFEFEKDLAAEALRRNENDFDQALNDLTNPETKSAMQVHIETRKRKRLRKAAESHIENFVRMGFERSRGTDVIYILRMARLAIHRLTMQSEEIPASAAGTEANSSSAANTGAAASAPLPDNIGSNMMLDLIDDVEGLPEGASNAEVRDVEMEDELSADIAKADALADYDIEVNIEGEAITEYLALVESAGSSRISGQKLHSQ 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1167 570 SMART uba_6 360 397 IPR015940 -
Sto12g1167 570 SMART uba_6 288 325 IPR015940 -
Sto12g1167 570 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 358 398 IPR015940 -
Sto12g1167 570 PANTHER NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN 20 557 IPR039749 -
Sto12g1167 570 Gene3D - 7 84 - -
Sto12g1167 570 SUPERFAMILY UBA-like 263 325 IPR009060 GO:0005515
Sto12g1167 570 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 286 326 IPR015940 -
Sto12g1167 570 SUPERFAMILY Ubiquitin-like 14 73 IPR029071 -
Sto12g1167 570 ProSiteProfiles Ubiquitin domain profile. 22 71 IPR000626 GO:0005515
Sto12g1167 570 Coils Coil 320 340 - -
Sto12g1167 570 Gene3D - 265 337 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1167 - - aip:107630532 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1167 12 7414812 7419304 Sto12g1167 12 7414812 7419304 ECH