Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1148 atggCGGGAAACGATTGGATAAACAGTTACTTGGAGGCTATACTGGATGTTGGACCGGGTCTGGACGATGCCAAGTCCTCTTTGCTTCTCAGAGAGAGAGGGAGGTTCAGTCCCACTCGCTACTTCGTTGCGGAGGTCATCTCTGGTTTTGATGAGACCGATCTCTACCGCTCTTGGGTTCGGGCTTCTGCGACGAGGAGTCCCCAGGAGAGGAACACTAGATTGGAGAATATGTGTTGGAGGATTTGGAATTTGGCTCGGCAAAAGAAGCAGCTTGAGAATGAGACAGCCCAACGAATGAATAAACGTCGCCTTGAACGTGAAAGAGGTCGCAGAGAAGCAACGGCTGATATGTCCGAGGACTTATCAGAGGGAGAAAAAGGAGATCCAGTGAGTGATATTTCAGCTCATGGTGATAGTACTAGAGGAAGACTTCCTAGAATCAGTTCTGCTGACGCTATGGAGACATGGGCTAACAGTCAGAAGGGGAAGAAGCTCTATATTGTACTTATAAGCATTCATGGTCTAATAAGAGGCGAGAATATGGAGCTTGGACGCGATTCTGATACTGGTGGTCAGGTTAAGTATGTTGTAGAACTTGCAAGGGCATTGGGTTCAATGCCAGGAGTTTACCGGGTTGATTTACTGACTAGACAAGTATCAGCACCAGATGTAGATTGGAGCTATGGGGAGCCCACAGAAATGTTAACTCCAAGGAACACAGATGATTTTGCGGATGATATGGGAGAGAGCAGTGGTGCTTATATCATTCGTATACCCTTTGGTCCAAGAGATAAATATATTCCCAAAGAACATCTTTGGCCTTACATTTCTGAATTTGTTGATGGTGCTCTTAGCCATATTATACAAATGTCAAAAGCTCTTGGGGAGGAAATCGGTGGCGGGCATGCTGTCTGGCCAGTTGCCATTCATGGACATTATGCAGATGCGGGTGACTCTGCTGCTCTTCTGTCTGGTGCTTTAAATGTTCCAATGCTTTTCACTGGACACTCACTCGGCCGAGATAAGTTAGAACAGCTTTTAAAGCAAGGTCGACTATCGAAGGATGAAATAAATTTCACATACAAGATTATGCGTCGGATAGAAGCTGAGGAATTAGCCCTTGACTCTTCTGAAATAGTCATAACAAGCACTAGACAGGAAATAGAACAACAATGGCGTTTGTATGATGGTTTTGATCCAGTATTGGAGCGTAAAATACGAGCGAGGATTAGGCGGAATGTGAGTTGCTATGGTAGATTCATGCCTCGCATGGCGATAATTGCACCAGGTATGGAGTTCCATCATATAGTTCCTCTAGATGGTGATATAGATGGTGAACCAGATGGAATTTTGGATCATCCTGCCCCTCAAGATCCACCTATTTGGTCCGAGATAATGCGGTTTTTTACCAACCCTCGCAAGCCAATGATACTTGCCCTTGCTAGACCAGACCCCAAAAAGAACATCACAACTTTAGTGAAAGCATTTGGAGAATGCCGTCCTCTACGAGAGCTTGCTAATCTGACATTAATTATGGGTAACCGAGATGGGATTGATGAAATGTCAAGCACAAGTGCTTCTGTTCTTCTCTCAGTACTTAAGCTGATTGACAAGTATGATTTATATGGGCAAGTGGCATATCCTAAACACCACAAACAATCTGATGTCCCTGACATATATCGTCTAGCTGCAAAGACAAAGGGTGTTTTTATTAACCCAGCTTTTATTGAGCCATTTGGTCTTACCTTAATTGAGGCAGCTGCTCACGGTTTGCCAATTGTTGCAACTAAAAATGGAGGTCCTGTTGATATCCATCGGGTACTTGACAATGGTCTACTTGTGGATCCCCATGATCAACAGTCAATTTCAGATGCACTTTTGAAGCTTGTTAGCAACAAGCAATTATGGGCAAAATGTAGGCAGAATGGGTTGAAgaatattcatctattttcatgGCCTGAGCATTGCAAGACTTACCTGTCAAAAATAGCCACTTGCAAACCAAGGTATCCACAATGGCTACGAAATGATGATGGAGGTGAAAGTTCGGAATCAGAATCACCTAGTGATTCTTTGAGAGATATACATGATTTATCTCTAAACCTGAAGTTTTCACTGGATGGAGAGAAGAGTGGGGGTAGTGGAAATGATAATTCTTTGGAATCTGAAGGAAGTGCAGCTGATAGAAAAACTAAATTAGAGAATGCAGTTTTGTCATGGTCAAAAGGTTTCTCTAAGGATACACGCAAGGGTGGAGAAAAATCAGATCAAAACACCAATGCTGGTAAATTTCCACCATTGAGGAGGAGGAAGTATCTCTTTGTCGTTGCAGTGGACTGCGATACTACCAAAGATCTTCTTGAATCCATTAAAGTGATCTTTGAGTCTGCAGGAAAGGAGAGGGCTGAAGGCTCTGTAGGGTTCATTTTGTCAACATCCTTAACAATATCTGAGATACACTCATTTCTGGTCTCAAGTGGCTTGAGCCCTAATGATTTTGATGCATATATTTGCAACAGTGGCAGTGATCTTTACTATCCATCCCTCACTTCTGAAGATCGTGCTTTTGTTGTTGACTTGTATTTTCACTCACACATTGAATACCATTGGGGTGGAGAAGGATTGAGAAAGACTTTGGTACGCTGGGCTGCTTCAATCACTGACAAGAAAGATGAGAAAGAGGAACAAATTGTGATTCCTTCTGAACAGCTTTCTACTGACTATTGTTATACTTTCAAAGTGCAAAATCCAGGAAAgGTTCCCCCTGTGAAGGAACTTCGTAAGCTTCTGAGAATCCAGGCTCTACGTTGTCACGTTATTTATTGTCAAAATGGAACAAGATTGAATGTAATTCCAGTACTGGCATCTCGTTCCCAAGCCCTCAGGTACCTCTATGTTCGATGGGGCTTTGAACTATCAAAGATGGTTGTGTTTGTTGGAGAATGTGGTGAAACTGATTATGAAGGATTACTTGGTGGTGTGCACAAAAAAGTTATACTGAAAGGAGTTGGTAGTAGTGCAATCAACCAACTCCATAACAATAGAAGCTATCCTCTTTCAGATGTCATTGCTCTGGACAGCCCCAATATTGTTGAGGCAAGTGATGGTAGTAGCAGTGCCGATATCCAGTGTTTGATAGAAAAAGCAGGATTTCTCAATGACTAA 3168 0.4252 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVAEVISGFDETDLYRSWVRASATRSPQERNTRLENMCWRIWNLARQKKQLENETAQRMNKRRLERERGRREATADMSEDLSEGEKGDPVSDISAHGDSTRGRLPRISSADAMETWANSQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNTDDFADDMGESSGAYIIRIPFGPRDKYIPKEHLWPYISEFVDGALSHIIQMSKALGEEIGGGHAVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSKDEINFTYKIMRRIEAEELALDSSEIVITSTRQEIEQQWRLYDGFDPVLERKIRARIRRNVSCYGRFMPRMAIIAPGMEFHHIVPLDGDIDGEPDGILDHPAPQDPPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSISDALLKLVSNKQLWAKCRQNGLKNIHLFSWPEHCKTYLSKIATCKPRYPQWLRNDDGGESSESESPSDSLRDIHDLSLNLKFSLDGEKSGGSGNDNSLESEGSAADRKTKLENAVLSWSKGFSKDTRKGGEKSDQNTNAGKFPPLRRRKYLFVVAVDCDTTKDLLESIKVIFESAGKERAEGSVGFILSTSLTISEIHSFLVSSGLSPNDFDAYICNSGSDLYYPSLTSEDRAFVVDLYFHSHIEYHWGGEGLRKTLVRWAASITDKKDEKEEQIVIPSEQLSTDYCYTFKVQNPGKVPPVKELRKLLRIQALRCHVIYCQNGTRLNVIPVLASRSQALRYLYVRWGFELSKMVVFVGECGETDYEGLLGGVHKKVILKGVGSSAINQLHNNRSYPLSDVIALDSPNIVEASDGSSSADIQCLIEKAGFLND 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1148 1055 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 182 662 - -
Sto12g1148 1055 MobiDBLite consensus disorder prediction 745 764 - -
Sto12g1148 1055 Pfam Sucrose synthase 250 432 IPR000368 GO:0005985|GO:0016157
Sto12g1148 1055 Gene3D - 808 994 IPR023214 -
Sto12g1148 1055 Pfam Glycosyl transferases group 1 471 645 IPR001296 GO:0016757
Sto12g1148 1055 PANTHER SUCROSE-PHOSPHATE SYNTHASE 3-RELATED 1 1052 IPR044161 GO:0005986|GO:0046524
Sto12g1148 1055 CDD GT4_sucrose_synthase 167 662 - -
Sto12g1148 1055 TIGRFAM sucrsPsyn_pln: sucrose phosphate synthase 1 1049 IPR012819 GO:0005985|GO:0046524
Sto12g1148 1055 Gene3D Glycogen Phosphorylase B; 432 652 - -
Sto12g1148 1055 PANTHER SUCROSE-PHOSPHATE SYNTHASE 1 1 1052 - -
Sto12g1148 1055 Coils Coil 75 105 - -
Sto12g1148 1055 MobiDBLite consensus disorder prediction 93 145 - -
Sto12g1148 1055 MobiDBLite consensus disorder prediction 707 729 - -
Sto12g1148 1055 Pfam Sucrose-6F-phosphate phosphohydrolase 802 988 IPR006380 -
Sto12g1148 1055 Gene3D - 871 954 - -
Sto12g1148 1055 MobiDBLite consensus disorder prediction 93 133 - -
Sto12g1148 1055 CDD HAD_SPS 774 1004 IPR035659 -
Sto12g1148 1055 Gene3D Glycogen Phosphorylase B; 168 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1148 Sto-Chr12 7252618 7258926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1148 1 1042 Glycosyltransferase AT5G20280 77.682 0.0 1665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1148 K00696 - gmx:100127429 1894.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1148 12 7252618 7258926 Sto12g1148 12 7252618 7258926 ECH