Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1140 atgTCAGGGGGCACGCAGAATAGTCTGAGAAAAGCACTTGGTGCCCTGAAGGACACGACTACAGTTTCATTGGCCAAAGTCAACAGTGATTACAAGGAATTggacatttctatagttagagcCACAAATCATGTGGAGCGTCCTGCGAAGGAAAAACATATAAGAGCTATTTTTTCTGCAATCTCAGCTACTCGACCTAGGGCTGATGTTGCATACTGCATCCATGCTCTTGCAAGACGATTATCCAAAACACACAACTGGGCGGTTGCATTAAAAACTTTAATTGTTATTCATCGAGCTTTGAGGGAAGTGGATCCAACATTTCATGAGGAACTCATAAATTATGGCAGaagcagaagtcatatgctcaACATGTCCCATTTCAAAGATGATTCCAGTCCAAATGCATGGGACTATTCAGCATGGGTCCGCACTTATGCTTTGTTTTTGGAGGAAAGACTGGAATGTTTTCGTGTATTAAAGTACGACATCGAGACAGATCGCCCAAGGACCAAAGATTTGGACACTGCGGAATTGCTGGAGCAACTGCCTGCATTACAACAACTTCTCTTTCGAGTTCTTTGTTGTCAGCCAGAGGGAGCAGCTGTGAATAACTTTGTCATTCAGCTAGCACTCTCCATGGTTGCTTCAGAAAGCATTAAAATTTATCAAGCTATCAGTGATGGTACAGTCAATTTGATTGATAAGTTCTTTGAGATGCAACGCCCTGATGCCGTGAGAGCTCTTGATATATACAGGAGGGCTGGGAAGCAGGCTGAGAGATTGTCTGAGTTTTATGAAATATGCCGTAATCTTGATGTTGGACGAGGAGAGAAGTTTATTAAAATTGAGCAGCCCCCTGCATCATTTCTACAAGCCATGGAAGAGTATGTCAAAGATGCTCCTCGGGATTCAACAGTCCGCAAGGATCAGCAGGTCAATGGCAACAAGATTGCCTCTCCAAAAGAAGTTTTGGCTATAGAATACAAAAAGACAGAGGTGCAGGAGGAAcgttccccatccccatcaCCACCTCCACCTCCACCTCCTGAACCTGTAAAAGTGGAAGCACCTGCAGCACAACCACCACCTGATTTGTTGAATTTGGAGGAAGATACTGTTCCGGCTGCTTCAGAGTTGGAAGAGAAGAATGCCTTGGCATTAGCCATAGTTCCAGTTTCTGATCAGCCAACTTCTGTTTCAAGTCAAGCAAATGGAACTACGGGCTGGGAATTGGCACTTGTTACAGCTCCAAGTTCAAATGAGACTGCAACTGCAGCTAGCAAATTGGCGGGAGGTTTAGACAAGCTTACACTAGACAGTCTATATGATGATGCAGTCAGAAGAAACAGCCAGAATGTGAGCTATAACCCATGGGAGCCAGCACCAATGGGACCCGTGATGCAACCGGCAATGCATGATCCATTTTTTGCCTCCCATACAGTAGCTGCTCCACCTTCTGTTCAGATGGCAGCTATGTCCAACCAGCAGCAAGCTTTCATGTTTCAGCAACAGCAGCAGCAAATGTTGATGATGGCCCCTCAGCAACCATCTGGGAATCCTTTTGGAAATCCTTATGGAGCCACGGTCCACCCCTATGGCTCAGGTATGCCCGTTCAAACACACAATCCATATACGGGTCTCATCTAA 1650 0.4364 MSGGTQNSLRKALGALKDTTTVSLAKVNSDYKELDISIVRATNHVERPAKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMSHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIETDRPRTKDLDTAELLEQLPALQQLLFRVLCCQPEGAAVNNFVIQLALSMVASESIKIYQAISDGTVNLIDKFFEMQRPDAVRALDIYRRAGKQAERLSEFYEICRNLDVGRGEKFIKIEQPPASFLQAMEEYVKDAPRDSTVRKDQQVNGNKIASPKEVLAIEYKKTEVQEERSPSPSPPPPPPPEPVKVEAPAAQPPPDLLNLEEDTVPAASELEEKNALALAIVPVSDQPTSVSSQANGTTGWELALVTAPSSNETATAASKLAGGLDKLTLDSLYDDAVRRNSQNVSYNPWEPAPMGPVMQPAMHDPFFASHTVAAPPSVQMAAMSNQQQAFMFQQQQQQMLMMAPQQPSGNPFGNPYGATVHPYGSGMPVQTHNPYTGLI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1140 549 MobiDBLite consensus disorder prediction 332 368 - -
Sto12g1140 549 CDD ANTH_N 34 157 - -
Sto12g1140 549 Gene3D - 7 164 IPR008942 -
Sto12g1140 549 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Sto12g1140 549 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Sto12g1140 549 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Sto12g1140 549 SUPERFAMILY GAT-like domain 169 300 - -
Sto12g1140 549 MobiDBLite consensus disorder prediction 339 359 - -
Sto12g1140 549 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 529 IPR045192 GO:0048268|GO:0072583
Sto12g1140 549 PANTHER OS06G0175500 PROTEIN 1 529 - -
Sto12g1140 549 Gene3D ANTH domain 165 317 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Sto12g1140 549 SMART enth_2 32 164 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1140 Sto-Chr12 7193970 7199033 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1140 K20043 - gmx:100815239 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1140 12 7193970 7199033 Sto12g1140 12 7193970 7199033 ECH