Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1082 ATGGGGTGGATCGCGGACACCGTCGATTCTGTCAAGTCCATTCAACTCAGACAAGCTCTAATCCAGATCGTCAATCTTGGCTTGATAGTGTCATCAGCGCTTATGATATGGAAGGGATTAATGTGTATAACTGGCAGCGAGTCACCTGTTGTTGTGGTGCTTTCTGGAAGTATGGAACCTGGATTCAAGAGAGGCGACATTTTGTTCTTGCATATGAGCAAGGATCCCATTCGTACAGGAGAGATAGTTGTTTTCAATATAGATGGACGTGATATTCCAATTGTCCACCGAGTAATTAAGGTTCATGAGCGTCAAGATACTGGAGAAGCCTATATTCTCACTAAAGGAGACAATAATGATATGGACGATAGGGTTCTGTACAATCATGGTCAGAATTGGCTGCAGAACCACCATATAATGGGCAGAGCTGTTGGGTTCTTACCTTATGTTGGTTGGGTGACAATAATGATGACCGAAAAGCCTGTGTTGAAGTACATACTTATAGGAGCTTTGGGATTGCTGGTGATAACATCAAAGGATTAG 543 0.4291 MGWIADTVDSVKSIQLRQALIQIVNLGLIVSSALMIWKGLMCITGSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGRDIPIVHRVIKVHERQDTGEAYILTKGDNNDMDDRVLYNHGQNWLQNHHIMGRAVGFLPYVGWVTIMMTEKPVLKYILIGALGLLVITSKD 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1082 180 SUPERFAMILY LexA/Signal peptidase 35 146 IPR036286 -
Sto12g1082 180 Gene3D Umud Fragment, subunit A 39 148 - -
Sto12g1082 180 CDD S26_SPase_I 49 143 IPR019533 GO:0004252|GO:0006465
Sto12g1082 180 Pfam Peptidase S24-like 37 144 IPR015927 -
Sto12g1082 180 PANTHER SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 1 180 IPR001733 GO:0006465|GO:0008233|GO:0016020
Sto12g1082 180 PRINTS Eukaryotic signal peptidase (S26B) family signature 53 68 IPR001733 GO:0006465|GO:0008233|GO:0016020
Sto12g1082 180 PRINTS Eukaryotic signal peptidase (S26B) family signature 112 123 IPR001733 GO:0006465|GO:0008233|GO:0016020
Sto12g1082 180 PANTHER SIGNAL PEPTIDASE I 1 180 - -
Sto12g1082 180 TIGRFAM sigpep_I_arch: signal peptidase I 32 176 IPR001733 GO:0006465|GO:0008233|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1082 Sto-Chr12 6765986 6769827 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1082 K13280 - pop:7478113 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1082 12 6765986 6769827 Sto12g1082 12 6765986 6769827 ECH