Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1065 ATGGCGACGGAGGCCTCCAATTCCATTTCCACCCTTCAATGTCTTCCCAACAACCACTACTCCACACCTCTGGTCTTGAATGTCTACGATCTCACCCCTCTCAACAATTACATGTATTGGATCGGACTTGGAATATTTCACTCTGGCATTGAAGTACATGGCAAGGAATATGGGTTTGGAGCTCATGAGTTCCCAACGAGTGGAGTTTTTGAAGTGGAGCCGAGGATGTGCCCTGGATTTATATACAGACGTTCCATCACCTTGGGCCAAATAAATATTCATCCTTCAGACTTTCGGAtgtttattgaaaaaatggcTTTGGAGTATTATGGGGATACCTATCAACTTCTCTCTAAGAATTGCAATCATTTTACAGATGATGTCTCACGCAGATTGATCGGAAAGGGGATCCCTGGCTGGGTTAATCGTCTTGCCAAGCTAGAACTAGACAGTCACAGTAGCTGCTCTCACTTTCTTCTGGGTATTCTGTGCAGCTGTTTACTTCCTGAAAGTCTTAAAGTATCTAATGTTCAACAACATCTGCCTGAATGCCAAGACAATCTAGAAGATGACGATCAGGAAACAGATGATGATCAAGAGAAGCAGCTTCTGCCATCTTTGCCTAGATTTGAAGATGTTTGTTTTGTTGAAGAGACCCCCCGAGCTTAA 669 0.426 MATEASNSISTLQCLPNNHYSTPLVLNVYDLTPLNNYMYWIGLGIFHSGIEVHGKEYGFGAHEFPTSGVFEVEPRMCPGFIYRRSITLGQINIHPSDFRMFIEKMALEYYGDTYQLLSKNCNHFTDDVSRRLIGKGIPGWVNRLAKLELDSHSSCSHFLLGILCSCLLPESLKVSNVQQHLPECQDNLEDDDQETDDDQEKQLLPSLPRFEDVCFVEETPRA 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1065 222 SMART DUF862_2a 22 164 IPR008580 GO:0008233
Sto12g1065 222 Pfam PPPDE putative peptidase domain 24 158 IPR008580 GO:0008233
Sto12g1065 222 PANTHER DESUMOYLATING ISOPEPTIDASE 14 219 IPR008580 GO:0008233
Sto12g1065 222 PANTHER EREBP-4 LIKE PROTEIN 14 219 - -
Sto12g1065 222 Gene3D PPPDE domains 17 167 IPR042266 -
Sto12g1065 222 ProSiteProfiles PPPDE domain profile. 22 172 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1065 Sto-Chr12 6688568 6690334 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1065 K22763 - gmx:100778961 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1065 12 6688568 6690334 Sto12g1065 12 6688568 6690334 ECH