Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1040 ATGGTGGCAACTGCTGCTACGTCTTCGTTTTTCCCTGTTAAGTCACCCTCACCAGGCTCTGGTGCAAAGACCACCAAACTTGCTGGTGGTTTAGGACTCAAATCCAAACCTGCATCTTCTGGTGGCTTGCAAGTTAAGGCAAATGCCCAAGCCCCAACCAAGATTAATGGAACACCTGTGGAAACTCTGAAGCATGAAAATGATTTTCCATCACCTGCCCCAAGGACTTTTATCAACCAGTTGCCTGATTGGAGCATGCTTCTAGCTGCTATCACAACCATTTTCTTGGCAGCAGAGAAGCAATGGATGATGCTTGATTGGAAGCCAAAGCGACCTGACATGCTTATGGACCCATTTGGTATAGGAAAAATTGTGCAGGATGGCCTTGTGTTCCGCCAGAACTTTTCTATTAGATCCTATGAAATAGGAGCTGATCGAACTGCTTCTATTGAGACGTTAATGAACCATTTGCAGGAAACCGCGCTTAATCATGTTAAGACTGCTGGGCTTCTTGGGGATGGTTTTGGTTCTACACCTGAGATGTGCAAAAAGAACTTGATATGGGTGGTTACACGGATGCAGGTTGTGGTTGACCGTTATCCGACTTGGGGTGATGTTGTTCAAGTAGACACTTGGGTTTCAGCATCCGGAAAGAACGGTATGCGTCGTGATTGGCTTGTGCGTGACTGCAAAACTGGTGAAACCTTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAACTGACGAGGAGGCTTTCTAAAATACCAGAAGAAGTCAGAGGAGAGATAGGGTCGTATTTTGTGAACTCTCCTCCAATTGTGGAAGAGGATGACAGAAAACTGCCTAAACTTGACGACAATACAGCAGATTATAAGCGTACTGGTTTAAGTCCTAGATGGAGTGATTTAGATGTCAATCAGCATGTTAACAATGTGAAATACATTGGCTGGATCCTGGAGAGTGCTCCACAACCAATTTTGGAGAGCCATGAGCTATGTGCCATGACTCTGGAGTATAGGAGGGAGTGTGGTAGGGACAGTGTACTGCAGTCCCTAACTGCTGTGTCTAGTGCTGATGTTGGCAATTTAGCTCAAAGCGGAGGTGTTGAGTGCAAGCACTTGCTTAGGCTTGAAGATGGTGCTGAGATTGTGAGGGGCAGGACTGGTTGGAGGCCAAAGCATTCCAACAACTTGGGTTCCAACAATGAGGTTCCAGCAGAAAGCACCTAA 1233 0.4615 MVATAATSSFFPVKSPSPGSGAKTTKLAGGLGLKSKPASSGGLQVKANAQAPTKINGTPVETLKHENDFPSPAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPKRPDMLMDPFGIGKIVQDGLVFRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCKTGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIGSYFVNSPPIVEEDDRKLPKLDDNTADYKRTGLSPRWSDLDVNQHVNNVKYIGWILESAPQPILESHELCAMTLEYRRECGRDSVLQSLTAVSSADVGNLAQSGGVECKHLLRLEDGAEIVRGRTGWRPKHSNNLGSNNEVPAEST 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1040 410 CDD 4HBT 131 247 - -
Sto12g1040 410 MobiDBLite consensus disorder prediction 394 410 - -
Sto12g1040 410 MobiDBLite consensus disorder prediction 1 57 - -
Sto12g1040 410 Pfam Acyl-ACP thioesterase 128 392 IPR002864 GO:0006633|GO:0016790
Sto12g1040 410 MobiDBLite consensus disorder prediction 389 410 - -
Sto12g1040 410 Gene3D Hotdog Thioesterase 121 398 - -
Sto12g1040 410 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 293 391 IPR029069 -
Sto12g1040 410 Pfam Acyl-ATP thioesterase 1 117 IPR021113 GO:0016790
Sto12g1040 410 MobiDBLite consensus disorder prediction 1 22 - -
Sto12g1040 410 MobiDBLite consensus disorder prediction 41 57 - -
Sto12g1040 410 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 397 IPR045023 GO:0006633|GO:0016297
Sto12g1040 410 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 397 - -
Sto12g1040 410 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 125 277 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1040 Sto-Chr12 6517092 6520011 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1040 1 394 Acyl Lipid Metabolism Gene Families AT1G08510 77.667 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1040 K10781 - gmx:100170693 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1040 12 6517092 6520011 Sto12g1040 12 6517092 6520011 ECH