Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1035 ATGGCACTATCTGATTGTGGGTACCCAATGGCGGCATTGCTCATCATCGTCTTCTTTGCTATGGCCACAAGAGGGTTTTGCGTTGGGGTGAATTGGGGAACCATGACTACCCATCAGCTTCCGCCTGAGAAGGTGGTGAAGATGCTGAAGGAAAATGGGTTTCGTAAGTTGAAGCTGTTTGATGCAGATGAGTGGATAATGTCGGCTCTTATGGGGACTGATATTGAGGTGATGGTAGCAATACCTAATAATATGTTGGAGGAGATGAGTAATAATCCCACGGCTGCAGATTCTTGGGTCGATGAGAATGTCACCAATTACTTGTATTCTGGTGGAGTCAATATCAAGTTGAGTATGCATGTCTTCAAAGTGTTTGCGTTTTTGCCTAGCAGAAAGTATGTTGCTGTGGGTAATGAGCCCTTTCTCAAAGCATATAATGGCAGCTATCTACATACTACTCTGCCAGCTCTAAAGAACATACAAGCATCACTCTACAATGCAGGGTTAGGCTCAAAGGTCAAAGTCACAGTCCCCTTCAATGCTGACATTTACTACTCCCCCGATTCGAATCCGGTGCCATCGGCCGGGGACTTCCGGCCCGATTTACGAGACCTCACGATAGAAATCATCCAGTTCTTGTACTCATGCAATGCACCATTCACAGTAAATATTTACCCCTTCCTTAGTCTCTACTATGGCAATGACAATTTCCCCTTTGAGTTTGCATTCTTTGATGGGATCATCAACAAGCCTCTTAGAGATGGGAATTCACTATACACCAATGTGTTTGATGCCAACTTTGATACTCTTCTATGGGCTTTAGACAAGGCAGGGTACCCTGACATGGAGGTCCTGGTTGGAGAAGTAGGGTGGCCTACTGATGGTGATAAGAATGCTAACATCCAGAATGCAAAGAGGTTCAACCAGGGCTTGCTGAAACATATTCTAAGTGGAAATGGCACCCCTAAAAGGAAAGCCATTCTTGACATCTATCTCTTCAGCCTCATCGATGAGAACGCGAAAAGTGTCGCCCCCGGGACCTTTGAGAGGCACTGGGGGATTTTTGAGTTTGATGGGAAGCCAAAGTATGAACTAGACTTAACAGGTGAAGAACAAAATAAGGGTCTGGTGGCTGTGGAAGGTGTGAAGTATATGGAGAAACAGTGGTGTGTTATGGACCCTGATGCTACTGAATCACAATACTTGGCTGATAGTATTGACTATGCTTGTAGTATGGCTGATTGTACAGCTTTAGGCTATGGATCTTCTTGTAGTAATCTAAGTGTACAGGGGAATGCTTCTTATGCTTTCAATATGTATTATCAAGTTCATAACCAAAGGGATTGGGACTGTGATTTCTCTGGTTTGGCTATTTTAACAGATGAGGATCCATCAGAAAAAGGATGCCAATTCCCTGTGATGATTTCTCATGCTTCTTCTTTGATTATACATGGAGGGCTGTCAGATATGCTACAGAAAGCTGTgggtgtatgtatatattttgcTTACGTTTTTGTTATAGCTCATGGGGTTTAA 1536 0.431 MALSDCGYPMAALLIIVFFAMATRGFCVGVNWGTMTTHQLPPEKVVKMLKENGFRKLKLFDADEWIMSALMGTDIEVMVAIPNNMLEEMSNNPTAADSWVDENVTNYLYSGGVNIKLSMHVFKVFAFLPSRKYVAVGNEPFLKAYNGSYLHTTLPALKNIQASLYNAGLGSKVKVTVPFNADIYYSPDSNPVPSAGDFRPDLRDLTIEIIQFLYSCNAPFTVNIYPFLSLYYGNDNFPFEFAFFDGIINKPLRDGNSLYTNVFDANFDTLLWALDKAGYPDMEVLVGEVGWPTDGDKNANIQNAKRFNQGLLKHILSGNGTPKRKAILDIYLFSLIDENAKSVAPGTFERHWGIFEFDGKPKYELDLTGEEQNKGLVAVEGVKYMEKQWCVMDPDATESQYLADSIDYACSMADCTALGYGSSCSNLSVQGNASYAFNMYYQVHNQRDWDCDFSGLAILTDEDPSEKGCQFPVMISHASSLIIHGGLSDMLQKAVGVCIYFAYVFVIAHGV 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1035 511 Gene3D - 383 480 - -
Sto12g1035 511 ProSitePatterns Glycosyl hydrolases family 17 signature. 282 295 IPR000490 GO:0004553|GO:0005975
Sto12g1035 511 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 8 495 IPR044965 GO:0004553|GO:0005975
Sto12g1035 511 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 8 495 - -
Sto12g1035 511 Gene3D Glycosidases 27 368 - -
Sto12g1035 511 SUPERFAMILY (Trans)glycosidases 28 366 IPR017853 -
Sto12g1035 511 Pfam X8 domain 388 457 IPR012946 -
Sto12g1035 511 Pfam Glycosyl hydrolases family 17 28 366 IPR000490 GO:0004553|GO:0005975
Sto12g1035 511 SMART X8_cls 388 471 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1035 Sto-Chr12 6471333 6472991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1035 28 475 Miscellaneous Gene Families AT2G19440 57.143 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1035 - - mtr:MTR_4g112025 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1035 12 6471333 6472991 Sto12g1035 12 6471333 6472991 ECH