Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1034 ATGGGGACTGAAGCAGTTGAAGTGAATCGTCTAACAAATGGGGAAGCTGAGAACAGTCATCACAAGCAAAGTGAGCAAGTTACCGCGGAAGGATTTACTGGAAGATGTGAAAATTCGCTTTCTGTTGGATATGATGGAAACCTTGGGAAAGTATCGGACAGTCTTGAAGTAAAGATACATCCTGATGCTAAAAGGGCTAGGCAGGAGAAGGAAGTGACTTTTCAGGATATGTATCAAAACCAAGACATGTTCGATGATGACGATGACGATGACAGTGATTGGGAGCCTTTACAGAAGAGTTTGGAAGTTATAAAGTGGTTCTGCAAAAACTGCACAATGGTTAACCTTGATGATGTCAACCAGTGTGATATATGTGGGGAACACAGAGATTCCAAAATCCTAAGCTATGGTTTTTTTGCATCCCCTTTTGCTGAAGACAAGGATCTGACTGAGGTCAACCCCAAAATTGAAGGTCTAAGAGATATTGGCACACAAGATTTAGCAACTAGTACTTCCACAGCAATTGGCTTTGATGAGAGAATGCTGCTACATGCTGAAGTTCAAATGAAATCACATCCACACCCTGAAAGACCAGATCGTCTTCGAGCCATTGCTGCTAGTCTTGCTACAGCTGGTATATTTCCTGGAAGATGCTATCCAATTTCTGCTAGAGAAATTACTCTAGAAGAACTTCAGTTGGTTCATTCTTTGGAGCATATTGAATCTGTGGAAGTTACGAGCCATGTAATATCAAGTTATTTCACTGCTGACACTTATGCCAATGAGCATTCAGCTCGTGCTGCTAGGCTGGCAGCTGGCTTATGTGCTGATCTGGCTTCAGAAATTGTTTCTGGACGTGCCAAAAATGGGTTTGCTTTGGTCAGGCCTCCTGGTCATCATGCTGGCGTCAGGCAGGCCATGGGCTTCTGCCTTCATAATAATGCTGCAGTGGCAGCATTAGCAGCTCAGGTTGCAGGTGCTAGGAAGGTGCTAATTGTAGATTGGGATGTTCATCATGGCAATGGAACTCAGGAGATATTTGAGCGAAACAAATCGGTCTTATATGTATCATTGCATAGACATGAGGGAGGAAGGTTTTATCCTGGTACTGGAGCTGCTTTTGAGATTGGTACCATGGGTGCAGAGGGATACTGTGTGAATGTTCCATGGAGTCGAGGAGGAGTTGGAGATAATGATTACATTTTTGCATTTCAGCATGTTGTCCTTCCATTAGCTTCCGAGTTTGCTCCAGATTTCACCATCATATCAGCTGGTTTTGATGCTGCAAGAGGGGATCCCTTGGGATGTTGTGATGTTACGCCTAATGGTTATGCACAGATGACAAACATGTTGAATGCCCTTTCTGGTGGAAAGCTACTTGTCATCCTTGAGGGGGGTTATAATCTCCGTTCTATATCATCTTCTGCCACTGCAGTAATCAAGGTGAATTATTCTGGCAGTataataaaAAAGGCATTGCTGGGTGAGAGTCCTGAATTTGAATTGGAAAACAACTTGCCTTCCAGATCTGGCCTTCAAACTGTTATGGAAGTCCTCAAAATTCAAATGAACTATTGGTTTTCCTTGGAACCCATTTTTGAGAATTTGCAGACACAATGGGGAGCGTACTGTCTCGAACCAAAAAGAAAAAGGAGTAAGAGAAGACGCCGTCTGCTGCTACCAATATGGTGGAAGTGGGGACGAAAAAGTTTTATGTATCATTCTCTGAATAGCCGTCTTCGTCTGAAGTCAAAGTGA 1758 0.4312 MGTEAVEVNRLTNGEAENSHHKQSEQVTAEGFTGRCENSLSVGYDGNLGKVSDSLEVKIHPDAKRARQEKEVTFQDMYQNQDMFDDDDDDDSDWEPLQKSLEVIKWFCKNCTMVNLDDVNQCDICGEHRDSKILSYGFFASPFAEDKDLTEVNPKIEGLRDIGTQDLATSTSTAIGFDERMLLHAEVQMKSHPHPERPDRLRAIAASLATAGIFPGRCYPISAREITLEELQLVHSLEHIESVEVTSHVISSYFTADTYANEHSARAARLAAGLCADLASEIVSGRAKNGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQVAGARKVLIVDWDVHHGNGTQEIFERNKSVLYVSLHRHEGGRFYPGTGAAFEIGTMGAEGYCVNVPWSRGGVGDNDYIFAFQHVVLPLASEFAPDFTIISAGFDAARGDPLGCCDVTPNGYAQMTNMLNALSGGKLLVILEGGYNLRSISSSATAVIKVNYSGSIIKKALLGESPEFELENNLPSRSGLQTVMEVLKIQMNYWFSLEPIFENLQTQWGAYCLEPKRKRSKRRRRLLLPIWWKWGRKSFMYHSLNSRLRLKSK 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1034 585 MobiDBLite consensus disorder prediction 1 30 - -
Sto12g1034 585 ProSitePatterns Zinc finger RanBP2-type signature. 106 125 IPR001876 -
Sto12g1034 585 Gene3D - 100 148 - -
Sto12g1034 585 PANTHER HISTONE DEACETYLASE 28 584 - -
Sto12g1034 585 SUPERFAMILY Arginase/deacetylase 170 486 IPR023696 -
Sto12g1034 585 Gene3D Histone deacetylase domain 169 532 IPR037138 -
Sto12g1034 585 PRINTS Histone deacetylase superfamily signature 296 319 IPR000286 -
Sto12g1034 585 PRINTS Histone deacetylase superfamily signature 329 344 IPR000286 -
Sto12g1034 585 PRINTS Histone deacetylase superfamily signature 417 427 IPR000286 -
Sto12g1034 585 Pfam Histone deacetylase domain 194 481 IPR023801 -
Sto12g1034 585 PANTHER HISTONE DEACETYLASE-RELATED 28 584 - -
Sto12g1034 585 CDD HDAC_classII 194 482 - -
Sto12g1034 585 SUPERFAMILY Ran binding protein zinc finger-like 104 129 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1034 Sto-Chr12 6452282 6458550 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1034 - - qsu:112024699 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1034 12 6452282 6458550 Sto12g1034 12 6452282 6458550 ECH