Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1029 ATGCATGCACATTTCTCAGATGGATTCGGTGGCCGATCATCTCATCAAAAAGATGATTCGATTACATTTTCGCTTCGAAGGTGGTTATCGTTTTGTGCGAATCATCGTAGGCTAGCGGCGACGGCATTCTATGATGAATCTGGATTTGTTGTTTTGATGATTACTACAGTGGGTTTGCCAAAGGACCTCAAAATGCGCAAAAAACTCATTACCCAAACTCTGCAATTCTTCGAAGGAGAAAGATTTATCAGTAGAGAGCATAGGATAGAGACAgaaaaacaaggagaagatgTTAAGTGGCGCAAATATTCTTACTGTTGTTTAGATTATGAACAGGTATTGGATGTGCTTAGGTACAGACTGGATCACATGGAGAAGAAGTTAAAAGATGATTTGGAGAAGAACGAACTTTATGGATATTTATGCCCAAACTGTGGAAAAAGCTATGATGCTTTCCATATATTTGTATGGTGGTTAATGTTAATGGCTTCTGAAGATGAggacttccgttgtgaaatttGTAAAGGCAATCTTAAGGTAGAAAGTGAAAATTTATCTGCTCCAAAAGAGGACTTGCTTCTGAAGATGAAGGAACAGCTCAAGCCTTTAATGGACCAACTTAATCTTGTAAAAGACTTGCCTGTTCATTTTGGCAGTCTTGCAGCATGGGAAGCACAAGCTACTGCTGCTTGCCATGCCGATGCGGCCAAACTGTATGTTCATATCAGTAATTGGAATTCATTGTTGTTTACTCGATTGAGATGGGACAGCTATAGTGGCAACTTTGGTAGGTTGAGCCATAAAATTGAAGATTTGGATCTGGCTACTTCAGTTGTAGCAGTAAGAAGGAAATAA 855 0.3766 MHAHFSDGFGGRSSHQKDDSITFSLRRWLSFCANHRRLAATAFYDESGFVVLMITTVGLPKDLKMRKKLITQTLQFFEGERFISREHRIETEKQGEDVKWRKYSYCCLDYEQVLDVLRYRLDHMEKKLKDDLEKNELYGYLCPNCGKSYDAFHIFVWWLMLMASEDEDFRCEICKGNLKVESENLSAPKEDLLLKMKEQLKPLMDQLNLVKDLPVHFGSLAAWEAQATAACHADAAKLYVHISNWNSLLFTRLRWDSYSGNFGRLSHKIEDLDLATSVVAVRRK 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1029 284 Pfam TFIIE alpha subunit 59 136 IPR024550 -
Sto12g1029 284 SMART tfiie3 45 194 IPR002853 GO:0006367
Sto12g1029 284 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT 37 232 IPR039997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1029 Sto-Chr12 6400762 6404779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1029 K03136 - gmx:100810405 171.014