Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1026 ATGGGGGATTTTGGAGGGTTACGAAGAATGGGTTTGGACCACGCTGAGCAAGAAGGAAGCGTACGAGTCGATGTGAGTGAATTACCATTCACAGAAATTACTGCACGCAGCGTGATGCCCACATTCACAGTTCCAATCGCTTTCAATCTCGCTTTGCCCAAGGCCACCATCACTGAATTGGATGTTCACAATTCGGAGAAGAGGTTTCTTTCTGTCATGGACAAGCTCTTCCATGCTCCCAAATCGGTACCGCATTCTTCCACCTCCAGCTCTCGGGGAGCACAACTATCAGGAGGTAAAAAACGGTCATATGAGTCAACTTTATTAGCGGCTATGGAATCAAATTTGAAAGGGAATGTTGCTGAGGGACAGCAGTCATCAGCTCCATCTGGAGCTCAATGTAGACCATGGGATCGTGGAGACTTTATGAAAAGATTAGCCACATTCAAATCCATATCGTGGTTTGCTAAACCCAAGGTAGTGAGTGCTGTAAATTGTGCTAGAAGAGGTTGGATCAATGTAGACGTTGATACCATAGCCTGTGAATCATGTGGGGCACGCCTCTTTTTCTCCACACCAGCTTCCTGGAACAAGCAGCAGGTTGAGAAGGCAGCCTTGGTTTTTAGCTTGAAGCTGGATAGTGGACATAAATTACTTTGTCCATGGGTCGACAATGCCTGTGATGAATCAGTGGCACGATTTCCACCTACACCTCCTCCAGTATTAGTTGATAATTTTAGAGAACGTTGTTCTGCTCTCATGAAACTATCAGCTCTTCCTCGAATTTCATTGTCAGCAGTAGAGTTCATGAAAGGCCCTCTACTGGAAGACTTACTTGAACACTCTTTGATGCTGGAGGGTGGAAATGGATCATCTAACAATTCTGAGATAGAACATCTTAGCAGCCAGCTTGAAGTGAAACTATATTATCAGGCTCAGAAGCTTATTAGTTTATGTGGCTGGAATCCTCGTTCTCTGCCTTACGTAATTGATTGCAAGGATACATCAGACCAGTcagttaaaaatacaaatatcttTGATTATTCTCACCTAGTTGCTGATGGGAAGAATAATAGCCTCATTGTGCATTCTACTAATGCTGATGAAAGTTTAAAAACAGATTATAAGAGTTATAATGGAGAACAAATGGATCCCAATTCTGTAGTTTTAGATTGTAGTCTATGTGGAGCCACTATTGGATTGTGGGCCTTCTGTACTCTTCCTCGGCCTGTTGAGTTATTCAGATTAGTGGGATTTACAGAGATTAATGGTGAAAATGATTTTGATAATTCATTCAATAAACGTGATCTTGAGAATAGGCAAGGTGTAACTAGTTCCTTGTCAGATGTTGCAACTTCATCGAAAAATAATTCTTCAAGTCTAAATATGACAATTGCTGGGGGTCCTCCCccaacaaaacaaaattttaaagcaACAATATCTTTTCCTGTTATCGGTCAGAATTTAAGGGCTCGGCTTTCTTATGATTCTGATTTTAGGGATCAGGCTTGTGTTGATGGAGATAGCATTGAGCCTGATTCACAGAAGAGCAAGCTTCAGGAGAAAATAGATTGTACATTTAATGATTCCACTACAGAACTTGTCCCTTTGCCATCTGAAAGAACAGAAAATTCAGAACATGAAACTGCTTCTCAAGCTAGTATTGATGATTCGGTTGTACATGATGTTATACCGGGCACCCAGAATGAAGAACACCCCTCAAGTTGTAAGGATGTGATTCCTATTCACGTAGAGTCAGATGGAATGAACAGTTCAGATGCTGTAGATCCTAGTAGCTCTCAGCAAGACTTGACAGAAGGTAAAGCACTTTCTGTTACAAAAAAGACTTTGGGTGTACAACTCGGTAGTCCTGAGAGTCATGGGGTCAAAGACGGAGTAAAGAATTCTGTGAACAATGAAGATTTGATTTGTACCTCAGGAAAATATCTGAAACAATTACCATCGAATAAAACAATGGAGTTTGATCCAATCAGGCAGCATAGGCACTTCTGCCCCTGGATTGCATCTATTAATGATGAGGAACCTGGATGGAAACAAACATTATCTGCCTTGTATTATCAGAAAAATCGTTTGCATTCTTCACCACATCGGTCTCCTTCATCCACTTCCATTGTTCAGGTGGATGACCCAATTGGTTCGGTAAGAAAGCTTTTCATGTCTCCATCCGCGAGAAGAATGAAACTACCTCGCATCTCAGGAGACAATACAGAGCAGAGGTAG 2241 0.4114 MGDFGGLRRMGLDHAEQEGSVRVDVSELPFTEITARSVMPTFTVPIAFNLALPKATITELDVHNSEKRFLSVMDKLFHAPKSVPHSSTSSSRGAQLSGGKKRSYESTLLAAMESNLKGNVAEGQQSSAPSGAQCRPWDRGDFMKRLATFKSISWFAKPKVVSAVNCARRGWINVDVDTIACESCGARLFFSTPASWNKQQVEKAALVFSLKLDSGHKLLCPWVDNACDESVARFPPTPPPVLVDNFRERCSALMKLSALPRISLSAVEFMKGPLLEDLLEHSLMLEGGNGSSNNSEIEHLSSQLEVKLYYQAQKLISLCGWNPRSLPYVIDCKDTSDQSVKNTNIFDYSHLVADGKNNSLIVHSTNADESLKTDYKSYNGEQMDPNSVVLDCSLCGATIGLWAFCTLPRPVELFRLVGFTEINGENDFDNSFNKRDLENRQGVTSSLSDVATSSKNNSSSLNMTIAGGPPPTKQNFKATISFPVIGQNLRARLSYDSDFRDQACVDGDSIEPDSQKSKLQEKIDCTFNDSTTELVPLPSERTENSEHETASQASIDDSVVHDVIPGTQNEEHPSSCKDVIPIHVESDGMNSSDAVDPSSSQQDLTEGKALSVTKKTLGVQLGSPESHGVKDGVKNSVNNEDLICTSGKYLKQLPSNKTMEFDPIRQHRHFCPWIASINDEEPGWKQTLSALYYQKNRLHSSPHRSPSSTSIVQVDDPIGSVRKLFMSPSARRMKLPRISGDNTEQR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1026 746 Pfam C3HC zinc finger-like 136 259 IPR012935 GO:0008270
Sto12g1026 746 PANTHER NUCLEAR-INTERACTING PARTNER OF ALK 79 734 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1026 Sto-Chr12 6376570 6382654 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1026 - - lja:Lj4g3v1784840.1 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1026 12 6376570 6382654 Sto12g1026 12 6376570 6382654 ECH