Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g1001 ATGTGCAGGACTGAGAGGAGTGAAAACAAGTGCCAAGATTTTGGAGATAAGCGTAGAGGAGGATTGATGGGATTCAAGACATTAGGAGAGAGTAGGGTGGAGAAGCTAAAAAATTCTGTGGCCGCGTCTTCGAGGTCCAGAATGAAGCTGTGGATGATACGTGCAACTACCTCGGTTTTGCTCTGGACATGCATCGTCCAGTTAACGGCGTTGGGTGATATATGGGGGCCGAGAGCTTTGAAAGGCTGGCCTTCATGTTTTACACACGATTCTGCGGCGAGGGTGATGGATATGGAGTTGCCTTCTGCACCTGCCAGAGTTCTCCCACCTAAGAGAGTATATAAAAACAACGGGTACCTGATGGTCTCATGTAATGGAGGACTAAACCAAATGAGATCAGCGATATGCGACATGGTAGCAATTGCAAGATATTTAAATGTCACGCTTATTGTCCCTGAACTGGATAAAACCTCATTCTGGGCTGATCCCAGTGAGTTCCAAGACATATTCGACGTTGATCACTTTATAACCTCCTTGAGAGATGAGGTGCGGATATTGAAAGAGTTACCCCCCAGACTCCAGCTAAGGGTGGAGCAAGGTTTACACTACAGCATGCCACCAATTAGTTGGTCTGACATATCTTACTATAAGAACCAGATTCTACCTTTAATACAAAAGTACAAAGTTGTCCATTTGAACCGAACTGATGCTCGACTAGCCAATAACGGTCAACCTTTAGAGCTTCAGAAACTGCGTTGCCGAGTTAATTTTAGTGCTCTGAGATTTACTTCTCAAATAGAAGAGCTGGGTAGAAAGGTGATCAAGCTTCTAAGGAAAAACGGTCCATTCCTGGTACTTCATTTGAGGTATGAGATGGACATGCTGGCATTTTCTGGTTGTACCCAAGGTTGCAACAGTGATGAGGTGGAGGAGTTGACAAGAATGAGATATGCTTACCCttggtggaaagaaaaaataattaactctgatttgaaaagaaaagatgGTTTGTGTCCTTTAACACCTGAAGAGACAGCCCTCACGCTTAGGGCCCTTGACATTGATCAAAACATTCAGATCTACATTGCAGCTGGCGAAATATATGGCGGGGAAAGGCGAATGGCGAGTCTTGCAAAGGATTATCCAAGATTGGTCAGGAAGGAGACATTGTTGGAGCCATCTGATCTTCAGTTCTTCCAAAATCATTCATCTCAGATGGCAGCTTTGGATTATCTTGTCTCATTGGAAAGTGATATCTTTGTGCCCACATATGATGGCAATATGGCCAAAGTAGTTGAAGGCCACCGCAGATATCTTGGGTTCAAGAAGACAATCTTATTGGACAGAAAGCTCCTGGTTGATTTGATAGATCAGTACAATAATGGGGTGTTAAACTGGGTTGAATTCTCATCGGCTGTGAAGAGAGCTCATGCTGATCGCATGGGAAACCCAAGTAAAAGATTAGTAATACCTGACAGGCCAAAAGAAGAGGACTATTTTTATGCGAATCCTGAGGAGTGTTTGGAACCCTCAGAAGATGATGATCCATTGAGTAGTGCGTGA 1563 0.4299 MCRTERSENKCQDFGDKRRGGLMGFKTLGESRVEKLKNSVAASSRSRMKLWMIRATTSVLLWTCIVQLTALGDIWGPRALKGWPSCFTHDSAARVMDMELPSAPARVLPPKRVYKNNGYLMVSCNGGLNQMRSAICDMVAIARYLNVTLIVPELDKTSFWADPSEFQDIFDVDHFITSLRDEVRILKELPPRLQLRVEQGLHYSMPPISWSDISYYKNQILPLIQKYKVVHLNRTDARLANNGQPLELQKLRCRVNFSALRFTSQIEELGRKVIKLLRKNGPFLVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETALTLRALDIDQNIQIYIAAGEIYGGERRMASLAKDYPRLVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYLGFKKTILLDRKLLVDLIDQYNNGVLNWVEFSSAVKRAHADRMGNPSKRLVIPDRPKEEDYFYANPEECLEPSEDDDPLSSA 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g1001 520 PIRSF UCP009360 19 505 IPR024709 -
Sto12g1001 520 CDD O-FucT_plant 119 444 IPR024709 -
Sto12g1001 520 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 29 513 - -
Sto12g1001 520 Pfam GDP-fucose protein O-fucosyltransferase 119 439 IPR019378 -
Sto12g1001 520 PANTHER OS02G0726500 PROTEIN-RELATED 29 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g1001 Sto-Chr12 6226651 6229599 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g1001 115 508 Miscellaneous Gene Families AT2G37980 49.747 7.90e-133 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g1001 K23280 - vvi:100247578 893.264
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g1001 12 6226651 6229599 Sto12g1001 12 6226651 6229599 ECH