Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto12g0997 ATGGACTTGTGGAACAAAGCTCGAACATTTGCGGCGGAGGCCGCAAAGCGATCCCAGGACCTATCCTTCGGCGCGGCCAAGTTTTCCGACGTTGTAGCCGAAGCCACCAAGCGCTCTAAGGAGATCGCCGCTGAAGCCTCCAAGCGAGCCGATCAGATTAGAATCGAAGCCATCAAGCGAGCCGAACCTTATGTGGGTTCTGGCATCGAAGAGAAGGATCTCATCAGTTTTGGTATCACCGACGAGTTGAGAGAGTTCGTCAAAGGGATCACCTTCACTACATTTCGAGATTTCCCTCTCCAAGATGAATGCGAATTGTCTGATGCTCCTACGGTTTCAAATGTTAGAAACGATCTCACAGAGTGGCAAGAAAGGCATGCCAATCTTGTTCTTTCTGCAGTCAAGGAGATTTCAAAATTAAGATATGAGCTGTGTCCACGTGTCATGAAAGAGAGGAAATTCTggaaaatatatttcatacttgTGAACAGTCACACTGCACCGTAA 507 0.4655 MDLWNKARTFAAEAAKRSQDLSFGAAKFSDVVAEATKRSKEIAAEASKRADQIRIEAIKRAEPYVGSGIEEKDLISFGITDELREFVKGITFTTFRDFPLQDECELSDAPTVSNVRNDLTEWQERHANLVLSAVKEISKLRYELCPRVMKERKFWKIYFILVNSHTAP 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto12g0997 168 PANTHER BSD DOMAIN PROTEIN 69 168 - -
Sto12g0997 168 PANTHER BSD DOMAIN PROTEIN 1 58 - -
Sto12g0997 168 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 58 - -
Sto12g0997 168 PANTHER BSD DOMAIN-CONTAINING PROTEIN 69 168 - -
Sto12g0997 168 SMART wurzfinal6 114 166 IPR005607 -
Sto12g0997 168 Gene3D BSD domain 93 167 IPR035925 -
Sto12g0997 168 ProSiteProfiles BSD domain profile. 114 166 IPR005607 -
Sto12g0997 168 Pfam BSD domain 119 165 IPR005607 -
Sto12g0997 168 SUPERFAMILY BSD domain-like 78 165 IPR035925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto12g0997 Sto-Chr12 6209437 6210603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto12g0997 2 168 EF-hand Containing Proteins AT1G69030 47.032 2.14e-57 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto12g0997 - - qsu:112037308 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto12g0997 12 6209437 6210603 Sto12g0997 12 6209437 6210603 ECH